| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0415 |
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| Symbol | |
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| ID | 4025879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 470513 |
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| End bp | 474730 |
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| Gene Length | 4218 bp |
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| Protein Length | 1405 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637965573 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_572476 |
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| Protein GI | 92112548 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0443299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TGGTGAAAGT CCTCAAATCG CAGGCACAGT CCGAAGAATT CGACGCGATC
AAGATCACGC TCGCGTCGCC GGACATGATT CGCTCGTGGT CTTACGGCGA AGTCAAGAAG
CCTGAGACCA TCAACTACCG TACGTTCAAG CCCGAGCGTG ATGGCCTGTT CTGCGCCAAG
ATCTTCGGTC CGGTCAAGGA TTACGAGTGC TTGTGCGGTA AGTACAAGCG CATGAAGCAT
CGTGGCATCA TCTGCGAGAA GTGCGGCGTC GAAGTGACCA AGGCCGCCGT GCGTCGCGAG
CGCATGGGGC ACATCGAGCT GGCCGCCCCG GTCGCGCATA TCTGGTTCCT GAAATCGCTG
CCGTCGCGCA TCGGCATGTT CCTCGACATG ACCCTGCGTG ACATCGAGCG TGTGCTGTAT
TTCGAAAGCT TCATGGTCAT CGATCCGGGC ATGACCACGC TGGAGCGCGG CCAGCTGCTC
AACGACGAGC AGTATTTCGA AGCCCTCGAA GAGTTCGGCG ACGACTTCGA TGCCCGCATG
GGTGCCGAGG CGGTTCAGGC GCTGCTCAAC GACGTTGATC TCGACGAGGA AATCGAGCGC
CTGCGTGAAG AGATTCCGCA GACCAACTCC GAAACCAAGA TCAAGAAGCT TTCCAAGCGC
CTGAAGCTGC TGGAGGCCTT CCAGAAGTCC GGAAACGATC CGGCCTGGAT GATCATGGAG
GTGCTGCCGG TACTGCCGCC GGACCTGCGT CCGCTGGTGC CGTTGGATGG CGGTCGTTTC
GCGACCTCGG ATCTCAACGA TCTGTACCGT CGCGTCATCA ACCGCAACAA CCGCCTCAAG
CGTCTGCTCG ACCTCAATGC GCCGGACATC ATCGTGCGCA ACGAGAAGCG CATGCTGCAG
GAATCCGTCG ACGCATTGCT CGACAACGGT CGCCGTGGTC GTGCCATCAC CGGTTCCAAC
AAGCGTCCGC TGAAGTCGCT CGCCGACATG ATCAAGGGCA AGCAGGGTCG CTTCCGTCAG
AACCTGCTGG GCAAGCGTGT CGACTATTCC GGCCGCTCGG TCATCACCGT CGGTCCGACG
CTGCGTCTGC ATCAGTGCGG TCTGCCCAAG AAGATGGCGC TGGAGCTGTT CAAGCCGTTC
ATCTACTCCA AGCTGCAGGC GGGCGGTCAG GCGTCCACCA TCAAGGCGGC CAAGAAGATG
GTCGAGCGCG AACTGCCGGA AGTGTGGGAC ATCCTCGCCG ATGTCATCCG CGAGCATCCG
GTGCTGCTCA ACCGCGCGCC GACGCTGCAC CGTCTGGGCA TCCAGGCGTT CGAGCCGCTG
TTGATCGAAG GCAAGGCGAT TCAGCTGCAC CCGCTGGTGT GTGCCGCCTA CAACGCCGAC
TTCGACGGCG ACCAGATGGC CGTTCACGTG CCGTTGACGC TGGAAGCCCA GCTCGAGTCG
CGCACCCTGA TGATGGCCAC CAACAACGTG CTGTCGCCGG CCAACGGCGA GCCGATCATC
GTGCCGTCCC AGGACGTGGT GCTGGGGCTG TACTACATGA CGCGCGAGAA GATCGGGGCG
CCGGGCGAAG GCATGGTGTT CTCCAACCTC GACGAAGTCG AGCGTGCGTT CGGTACCCAG
TCGGTGTCGC TGCATGCACG GGTGAAAGTG CGTCTGACCG AGTACGATCG CGACGAAGAC
GGTGGGGAGT GGACCTCGAG CACCAAGATC CATGACACCA CGGTCGGGCG TGCCTTGCTG
TACCGCATTC TGCCCAAGGG CATGCCGTTC GAGCTGGTCG ACCAGCCGAT GAAGAAGAAG
GCGATCTCCG GGCTGATCAA CGCCGTGTAT CGCCGTTCCG GTCTCAAGGA CACGGTGATC
TTCGCCGACC AGTTGATGTA TACCGGCTTC CGCCTGGCGA CCTGGTCCGG CGCTTCGATC
GGTGTCAACG ACTTCGTCAT CCCCGACTCG AAGAAGGAAA TCGTCGACGG GGCCGAAGAG
GAAGTGAAGG AAATCGAGAA CCAGTTCTCC TCGGGCCTCG TGACGGCCGG CGAGAAGTAC
AACAAGGTCA TCGATATCTG GTCCAAGGCC AACGACAAGG TGGCCAAGGC GATGATGGCG
GGCATTTCCA AGGAAACCGC CATCGATCGC GAAGGCAACG AAGTCGAGCA GGACTCGTTC
AACAGCGTCT TCATCATGGC GGACTCCGGG GCGCGTGGTA GCGCTGCCCA GATCCGTCAG
CTGGCGGGCA TGCGCGGTCT GATGGCCAAG CCGGACGGCT CGATCATCGA GACCCCGATC
ACCGCCAACT TCCGTGAAGG CCTGAACGTA CTGCAGTACT TCATCTCGAC CCACGGCGCT
CGTAAGGGCC TCGCGGATAC GGCGCTGAAA ACCGCCAACT CCGGTTACCT GACACGTCGT
CTGGTCGATG TCTCGCAGGA CCTGGTCATC ACCGAAGAAG ACTGCGGCAC CGAAGACGGT
CTGACGCTGC ATCCGGTGAT CGAGGGCGGT GATGTCATCG TCTCGCTGGC ACAGCGCGTG
CTGGGTCGCG TCGTGGCCCA GGATGTCGTC GATCCGGCGA CCGACGACGT GTTGATCGCG
CGTGGCACGC TGCTCGATGA AGCCTGGTGT GCGCGTCTCG ACACCATGGG CGTGGACGAG
ATCGTCGTGC GCAGCGCCAT CACCTGCGAA ACCGCGCATG GCGTCTGCTC GGCGTGCTAC
GGGCGCGATC TGGCGCGTGG CCACCAGGTC AACGTCGGTG AGGCCGTGGG CGTCATCGCC
GCGCAGTCCA TCGGCGAGCC GGGCACCCAG CTCACCATGC GCACGTTCCA CATCGGTGGT
GCGGCATCGC GTGCCTCGGC GGTGGATAGC GTGCAGGTCA AGCATGGCGG CACGGTGCGT
CTGCACAACA TCAAGCACGT CGAGCGCAGC GACGGCAAAC TCGTCGTCGT CTCTCGCTCC
AGCGCCCTGG CCGTCGCCGA CGAGCATGGT CGCGAGCGCG AGTACTACAA GCTGCCGTAC
GGTGCCGAGC TGTCGGTGCG TGACGGTGAC ATGGTCGAAG CGGGAACGCC GGTCGCCAAG
TGGGATCCGC ACACTCATCC GGTCGTCGCC GAGGTCGAGG GCAAGGTCCA GTTCAGCGAT
ATGGAGGAAG GTCTGACCAT CCACCGTAGC GTGGACGAGA TGACCGGCCT GTCGAACATC
GAGGTGATCG AAAGCGCCAG CCGTCCCGCC TCCGGGCGTG ACAAGCGCCC CATGATCATG
CTGCTCGACG AAAACGGCGG GCATGTCACG TTGCCGGGCT CCAACACGCC GGTTCAGTAC
ATGCTGCCGG GCAAGGCGAT CATCTCGGTC GAGAACGGCG GCCAGGTGGG CGTTGGCGAA
GTCATCGCGC GCATCCCGGT GGAAGCGTCC GGCAACAAGG ACATCACCGG GGGTCTCCCG
CGTGTCGCGG ATCTGTTCGA GGCGCGCAAG CCCAAGGAAC CGGCCATCCT CGCCGAGGTC
ACAGGTACCA TCAGCTTCGG CAAGGAAACC AAGGGCAAGC GTCGTCTGAC GATCACCCCG
GAAGAGGGCG ATCCGCTCGA GATGCTGATC CCCAAATGGC GTCAGATCGG GGTGTTCGAG
GGCGAGACCG TCGAGAAGGG CGAGGTCATC TCCGATGGTC CCAGCAACCC GCACGACATC
CTGCGTCTGC TGGGCGTGGC CGAGCTGGCC AAGTACATCA CCGCCGAGAT TCAGGACGTC
TATCGTCTGC AGGGCGTGGT GATCGATGAC AAGCACATCG AGGTCATCGT GCGCCAGATG
CTGCGCAAGG TAGAAATCAC CGATTCCGGG GATTCTTCCT TCATCACGGG TGATCAGGTG
GAGTTCGTCC GCGTGCTCGA GGAGAACCAG CGCCTGGCTC AGGAAGACAA GTTTCCGGCC
AAGTACGACC GGCTGCTGCT GGGTATCACC AAGGCAAGCC TGGCCACCGA GTCGTTCATC
TCCGCGGCTT CGTTCCAGGA GACCACGCGC GTGCTCACCG AGGCCGCCGT CACCGGCAAG
CGCGATTATC TGCGCGGTCT CAAGGAGAAC GTCGTGGTGG GTCGCCTGGT GCCGGCCGGC
ACGGGCCTGG CCCACCATGC CGAACGCCGC CGCCGGCGCG AGGATCCCGA GAGCACGGCC
AACCCGTCGG CCTTCGACGT CGAACAGGAG CTGGGTGCCC AGCTTACCGC GTTGGATGCC
GAGGACGACG ACCTCTAG
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| Protein sequence | MKDLVKVLKS QAQSEEFDAI KITLASPDMI RSWSYGEVKK PETINYRTFK PERDGLFCAK
IFGPVKDYEC LCGKYKRMKH RGIICEKCGV EVTKAAVRRE RMGHIELAAP VAHIWFLKSL
PSRIGMFLDM TLRDIERVLY FESFMVIDPG MTTLERGQLL NDEQYFEALE EFGDDFDARM
GAEAVQALLN DVDLDEEIER LREEIPQTNS ETKIKKLSKR LKLLEAFQKS GNDPAWMIME
VLPVLPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLLDLNAPDI IVRNEKRMLQ
ESVDALLDNG RRGRAITGSN KRPLKSLADM IKGKQGRFRQ NLLGKRVDYS GRSVITVGPT
LRLHQCGLPK KMALELFKPF IYSKLQAGGQ ASTIKAAKKM VERELPEVWD ILADVIREHP
VLLNRAPTLH RLGIQAFEPL LIEGKAIQLH PLVCAAYNAD FDGDQMAVHV PLTLEAQLES
RTLMMATNNV LSPANGEPII VPSQDVVLGL YYMTREKIGA PGEGMVFSNL DEVERAFGTQ
SVSLHARVKV RLTEYDRDED GGEWTSSTKI HDTTVGRALL YRILPKGMPF ELVDQPMKKK
AISGLINAVY RRSGLKDTVI FADQLMYTGF RLATWSGASI GVNDFVIPDS KKEIVDGAEE
EVKEIENQFS SGLVTAGEKY NKVIDIWSKA NDKVAKAMMA GISKETAIDR EGNEVEQDSF
NSVFIMADSG ARGSAAQIRQ LAGMRGLMAK PDGSIIETPI TANFREGLNV LQYFISTHGA
RKGLADTALK TANSGYLTRR LVDVSQDLVI TEEDCGTEDG LTLHPVIEGG DVIVSLAQRV
LGRVVAQDVV DPATDDVLIA RGTLLDEAWC ARLDTMGVDE IVVRSAITCE TAHGVCSACY
GRDLARGHQV NVGEAVGVIA AQSIGEPGTQ LTMRTFHIGG AASRASAVDS VQVKHGGTVR
LHNIKHVERS DGKLVVVSRS SALAVADEHG REREYYKLPY GAELSVRDGD MVEAGTPVAK
WDPHTHPVVA EVEGKVQFSD MEEGLTIHRS VDEMTGLSNI EVIESASRPA SGRDKRPMIM
LLDENGGHVT LPGSNTPVQY MLPGKAIISV ENGGQVGVGE VIARIPVEAS GNKDITGGLP
RVADLFEARK PKEPAILAEV TGTISFGKET KGKRRLTITP EEGDPLEMLI PKWRQIGVFE
GETVEKGEVI SDGPSNPHDI LRLLGVAELA KYITAEIQDV YRLQGVVIDD KHIEVIVRQM
LRKVEITDSG DSSFITGDQV EFVRVLEENQ RLAQEDKFPA KYDRLLLGIT KASLATESFI
SAASFQETTR VLTEAAVTGK RDYLRGLKEN VVVGRLVPAG TGLAHHAERR RRREDPESTA
NPSAFDVEQE LGAQLTALDA EDDDL
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