Gene Csal_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0406 
Symbol 
ID4026101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand+ 
Start bp460283 
End bp461263 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content64% 
IMG OID637965560 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_572467 
Protein GI92112539 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.617579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATTG GCGACTTGAT TCGTCTGCTG AGCGACGGCG AGTACCACTC CGGCGAACAA 
TTGGGCGAAA AGCTCGGTGT GTCGCGCACC GCAGTGTGGA AGCAGCTCAA GAAGCTGGAA 
TCCATGGGGC TTCAGCTCGA AGCGGTCAAA GGGCTGGGAT ACCGTCTGAC CGCACCGTTG 
GACCTGCTTT CCGGCCCGGC CATCATAGAA AGGCTGCCGG CGGAGCCTCG TCATCACCTG 
ACGCGCCTGT TCGTCGAAGA CGAGCTCGTG TCGACGAACA GCTTCCTGCG CGAACGTTTC 
CAGCAGGGTG CCGGACATGC CGAGGTATGC TTGGCGGAGA GCCAGACCGC TGGCCGAGGC 
CGGCGTGGAC GCGACTGGCT CTCCCCGTGG GGACGTGGCC TGGTGTTTTC GCTGGGGTGG 
CGTTTCGACG AGGGGGCCTC GGCGCTGGAG GGCTTGAGCC TGGCGGTCGG CGTGGTATTG 
GCGGAAGTGC TGGAGCAGCT TTCGGCATCG GTGGCGCTCA AATGGCCCAA CGACGTCCTG 
CTGTGTCGAG AGCAGGGACC TGCCAAGCTG GCAGGCATAC TGCTGGAGGT CAGTGGTGAT 
GTGGCCGGTC CTTGCGAGGT GGTGATCGGC ATCGGGCTCA ACGTCGAGCT CCCCGACAGC 
CTTCGCGAGA GCGTGGATCA GCCCATCGCG GCATTGCGCG ACGTAGTGCC GAGCGTCTCG 
CGGAATGCCC TGGCCGCCTC CTTGATCGAA GCCCTGCTGG GCATGCTGCC GCGTTTCGAG 
ACGCATGGTT TCGAGCCATG GCGTGATGCA TGGAATCGTC GCAATGCCTA TGCAGGGCAG 
GAAATCGATG TCCACCAGGG CACGCAGGCC TATGTGGCGG TGGCCGAGGG GGTGGATGAT 
ACCGGCAACC TGCGCGTCAA CGTCGACGGA CAAGCCCGGC TCCTGGCCGG TGGTGAAATC 
AGCCTGCGCC TACGCTCATG A
 
Protein sequence
MTIGDLIRLL SDGEYHSGEQ LGEKLGVSRT AVWKQLKKLE SMGLQLEAVK GLGYRLTAPL 
DLLSGPAIIE RLPAEPRHHL TRLFVEDELV STNSFLRERF QQGAGHAEVC LAESQTAGRG 
RRGRDWLSPW GRGLVFSLGW RFDEGASALE GLSLAVGVVL AEVLEQLSAS VALKWPNDVL 
LCREQGPAKL AGILLEVSGD VAGPCEVVIG IGLNVELPDS LRESVDQPIA ALRDVVPSVS 
RNALAASLIE ALLGMLPRFE THGFEPWRDA WNRRNAYAGQ EIDVHQGTQA YVAVAEGVDD 
TGNLRVNVDG QARLLAGGEI SLRLRS