Gene Csal_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0404 
SymbollldD 
ID4025998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp450240 
End bp451418 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content66% 
IMG OID637965553 
ProductL-lactate dehydrogenase 
Protein accessionYP_572465 
Protein GI92112537 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTT CCGCTTCCAC GGACTACCGT CACGCCGCCA AGCGACGCCT TCCGCCCTTT 
CTCTTTCACT ATGCCGACGG GGGCGCCTAC GCCGAGCATA CGCTGCGTCG CAATGTCGAG
GATCTTGCCG GTATCGCGTT GCGTCAACGC GTATTGAAGG ACATGTCCCA TTTGTCCCTG
GAGACCGAGC TGTTCGGCGA ACCTCTGGCC ATGCCCGTCG CCCTGGCCCC CGTGGGGCTG
GCCGGCATGT ATGCCCGGCG CGGCGAGGTG CAGGCGGCGC GCGCCGCGGC CTCGAAAGGC
ATCCCGTTCA CGCTGTCGAC GGTGTCGGTG TGTCCCATCG CTGAGGTGGC CTCGGCCATC
GAGCGGCCTC TCTGGTTCCA GCTCTATGTA CTGCGGGACA GGGGCTTCAT GAAGCATGTG
CTGGAGCGTG CCAAGGCCGC CGGCGTCAAG ACGCTCGTCT TCACGGTCGA CATGCCGGTG
CCCGGCGCGC GCTATCGCGA TGCGCACTCC GGCATGAGCG GCAAGCACGG GGGCCTTCGG
CGCATGCTGC AGGCCGTGAC GCATCCGTCC TGGGCCTGGG ACGTGGGGCT TCACGGCCGG
CCGCACGATC TGGGCAACGT GTCCGATTAT CGCGGCCAGC CGACGGAGCT CGAAGACTAC
ATTGCCTGGC TCGGCAACAA CTTCGATCCT TCCATTTCCT GGAAGGATCT GGAATGGATC
CGCGAGTTCT GGGACGGGCC GATGATCATC AAGGGCATTC TCGACCCCGA GGATGCCCGC
GATGCGGTGC GCTTCGGCGC GGATGGCATC GTCGTGTCCA ATCACGGCGG CCGTCAGCTC
GACGGTGTGC CCTCCACCGC GCGTGCTCTG CCGGCGATCG CCGATGCGGT CAAGGGCGAC
CTGGCCATCC TGGCCGATTC CGGCGTGCGC AATGGGCTCG ATGTCGTGCG GATGATCGCC
ATGGGGGCTG ATACTATATT GTTGGGGCGT GCCTATATCT ATGCGCTGGC CACCGCCGGC
GAGGCGGGCG TTGCCCACCT GCTCGAGCTG TTCGAGAAGG AGATGCGGGT CGCGATGACG
CTCACCGGCG CGCGCTCCAT CGCCGAGCTG GGTTCGGATT CGCTGGTCAC CGGGTCTGCG
GCGGCGTCGA TCGAACGCAC GCTTTCGCCG AGCCTGTAA
 
Protein sequence
MIISASTDYR HAAKRRLPPF LFHYADGGAY AEHTLRRNVE DLAGIALRQR VLKDMSHLSL 
ETELFGEPLA MPVALAPVGL AGMYARRGEV QAARAAASKG IPFTLSTVSV CPIAEVASAI
ERPLWFQLYV LRDRGFMKHV LERAKAAGVK TLVFTVDMPV PGARYRDAHS GMSGKHGGLR
RMLQAVTHPS WAWDVGLHGR PHDLGNVSDY RGQPTELEDY IAWLGNNFDP SISWKDLEWI
REFWDGPMII KGILDPEDAR DAVRFGADGI VVSNHGGRQL DGVPSTARAL PAIADAVKGD
LAILADSGVR NGLDVVRMIA MGADTILLGR AYIYALATAG EAGVAHLLEL FEKEMRVAMT
LTGARSIAEL GSDSLVTGSA AASIERTLSP SL