| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0388 |
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| Symbol | |
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| ID | 4026567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 434388 |
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| End bp | 436562 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637965537 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_572449 |
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| Protein GI | 92112521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.648814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGATG AGAAATACGC GCAGGCCGCC GAAGGGGATG ACAAGGCGGT CAAGGAAGCG
CTGGAAAAGT TCGATCGCGA GAGCCTGGTG CGCGATGCCT TGCCCGGTTT CGTGCTCAAG
TTCGTCACCG TGGTGGCGGT GGTGCTGGCG GTGTTCCACC TGTACACGTC GTTTTCCGGC
CCGCTGGTCG ACGTGGCGCA GCGCAGCATC CACCTCTACA CCCTGCTGGG GCTGACGTTC
ATCCTCTATC CCTTGACCCG CAAGGGTGCG CGCGATCGTG TGCCGTGGGG TGACGCCATC
CTCGCGGTGC TGGCGTTCGG TGTCGGCGTC TACATGCTGG TGGTGTCCGA GCGCGTCATC
GCCTCGGCGG GGCGGATCAA CGACATCGAC ATGCTGGTGG GCTTCTTGGC CATCCTGCTG
GTGCTCGACG CCACCCGGCG TGCGACCGGC TGGGGGCTGA CCCTGCTGGC GACGATCTTT
CTGGTGTATG GGTTCTACGC CAAGCTGTCG TTCTATCCGC AACTGAATGA AACGATCATC
ATGGCGACCG GCCGCCAGGT GATGTCGCAC CTGGTGTTCA TCACCGAAGG CCTGCTGGGC
ACCGCCATCG GGGTGTCGGC CAGCTATATC ATTCTGTTCA TCCTGTTCGG CGCCTTCCTG
GGCAAGTCGG GGCTGGGGCA GCTGTTCAAT GACCTGGCGC TTGCCGTGGC AGGACATACC
CGCGGCGGGC CGGCCAAGGT GGCGGTCATC GCCAGCGGCT TTCTGGGGTC GATCAATGGT
TCGGCGATCG CCAATGTCGT GACCACCGGC GCGTTCACCA TTCCGTTGAT GAAGCGTACC
GGCTACAAGC CGAATTTCGC GGGGGCCGTC GAGGCCTCGG CCAGTGTCGG GGGGCAGATC
CTGCCGCCGA TCATGGGGGC GGCGGCCTTC ATCATGGCGG AGGTGCTGTC GGTGCCCTAC
ACCCAGGTGA TCCTGGCCGG CATCATCCCG GCGCTGCTCT TCTACCTCGG GGTCCTGTTC
CAGGTGCATC TGCGCGCCCT GCGCAACGGG CTGGAGGGCA TTCCGCGTTC CGAACTGACG
CCGCTCAAGG CCGTCATGCT CAAGCGGGGC CACCTGCTGG TGCCGATGGT GGTACTGCTG
TGGCTGCTCT TCGACGGTCG CGCCCCGTTC TTCGCGGCAT TCTGGTCGAT CGCCGCGACC
GTGCTGATCT GCGGGACGCG TCGTGTCACC CTGGGGGTCA GCGCGATTCT GGCGCTGCTG
ATCTTCGAGC CGCAATGGCG CGCCTTGCTC GAGGGATATG CCCAGCCCGA CATGACGGCG
AGCCGCTGGG CATTGTTCGT GATCATCGCC GTGCCGGTGG CGATCAATGC CTTGCGTGCC
AAGCTCGGCC TGGTGGCGGA GAAAATGGAC ATCGCCGATT GCCGCGATGC GATGCACGAT
GGCGTGCGCA ATGCCATTCC CGTGGCCGTG GCCTGCGGCG CGGTGGGCAT CATCGTGGGG
ATCGCCACAC TCACCGGCAT CGCCCTGGAA GCCGCCGACG CGGTGGTGGC GCTGGGACAG
CAGATTCCCA TTCCGATGCT GCAGCTGCTG GTGACCCTGT TCCTGACCAT GATCGCGTCC
ATCGTGCTGG GCATGGGGCT GCCGAGCATC CCGACCTATA TCATCACCAG CACCATGGCG
GCGCCGATCC TGCTCAACCT GCCGCTGTTC CGCGAGCTGG CGGGCAGCAA CGAGACGGCG
ATCTTCGTGG CGCACATGTT CGTGTTCTAT TTCGGGCTGT TCGCCAATCT GACCCCGCCG
GTGGCCCTGG CTGCCTATGC CGGTGCCGGC ATCAGTGGCG GCTCGCCCAA TGCCACGGGC
TTCCAGGCCA TGAAGCTGGC CATCGCCGGG TTCGTGGTGC CCTACATGTT CGTGTTCGCG
CACAGCATGC TGATGATCGA CGCCACGCTG GCCAACATCC TGTGGGTCGT CGTCACCGGT
GTGGTCGGGG TATTGCTGCT GGCCGTGGCG GTGGAGGGCT ACCTGCGTCG TCCTCTCAAT
CCCTTCTGGC GCCTGCTGGC GGCGGCCGGG GCCTTGACGC TGATCTACCC CGGCTTGATC
AGCGACGTCA TCGGTGCGGT CATCGCGCTG GGACTCTTCC TGCTGGCCAA GCAGGAAACG
CCCAAGGTGG CGTGA
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| Protein sequence | MSDEKYAQAA EGDDKAVKEA LEKFDRESLV RDALPGFVLK FVTVVAVVLA VFHLYTSFSG
PLVDVAQRSI HLYTLLGLTF ILYPLTRKGA RDRVPWGDAI LAVLAFGVGV YMLVVSERVI
ASAGRINDID MLVGFLAILL VLDATRRATG WGLTLLATIF LVYGFYAKLS FYPQLNETII
MATGRQVMSH LVFITEGLLG TAIGVSASYI ILFILFGAFL GKSGLGQLFN DLALAVAGHT
RGGPAKVAVI ASGFLGSING SAIANVVTTG AFTIPLMKRT GYKPNFAGAV EASASVGGQI
LPPIMGAAAF IMAEVLSVPY TQVILAGIIP ALLFYLGVLF QVHLRALRNG LEGIPRSELT
PLKAVMLKRG HLLVPMVVLL WLLFDGRAPF FAAFWSIAAT VLICGTRRVT LGVSAILALL
IFEPQWRALL EGYAQPDMTA SRWALFVIIA VPVAINALRA KLGLVAEKMD IADCRDAMHD
GVRNAIPVAV ACGAVGIIVG IATLTGIALE AADAVVALGQ QIPIPMLQLL VTLFLTMIAS
IVLGMGLPSI PTYIITSTMA APILLNLPLF RELAGSNETA IFVAHMFVFY FGLFANLTPP
VALAAYAGAG ISGGSPNATG FQAMKLAIAG FVVPYMFVFA HSMLMIDATL ANILWVVVTG
VVGVLLLAVA VEGYLRRPLN PFWRLLAAAG ALTLIYPGLI SDVIGAVIAL GLFLLAKQET
PKVA
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