Gene Csal_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0335 
Symbol 
ID4026879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp372718 
End bp373905 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID637965484 
Productalcohol dehydrogenase GroES-like protein 
Protein accessionYP_572396 
Protein GI92112468 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR02819] formaldehyde dehydrogenase, glutathione-independent 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAATA ATCGTGGTGT CGTCTATACC GGGCCCGGCA AGGTCGAGGT TCAGGACATT 
GCTTACCCCA AGATGCAAGC GCCCAGTGGC AAGGCCATTG AACATGGGGT GATCCTCAAG
GTGGTTTCCA CCAATATCTG CGGTTCCGAC CAGCACATGG TGCGTGGCCG CACGACGGCG
CCGGCGGGCA TGGTGCTGGG TCACGAGATC ACCGGCGAGG TCATCGAGAA GGGCAAGGAT
GTCGAGTTTC TCGACATCGG GGACCTGGTC TCGGTGCCGT TCAACGTCGC GTGCGGTCGC
TGCCGGACCT GCAAGGAAGG CCACACCGGG CTGTGTCTGC ACGTCAACGA CGAGCGTGCC
GGCGGGGCGT ACGGCTACGT CGACATGGGC GGCTGGGTCG GTGGTCAGGC GCACTATGTC
ATGGTGCCGT ATGCCGACTT CAACTTGCTC AAGTTTCCGG ATCGCGATCA GGCGATGGAC
AGGATCCGCG ACCTGACGAT GCTGAGCGAT ATCCTGCCGA CCGGCTTCCA TGGTGCCTTG
AATGCCAAGG TGGGTGCGGG CTCGACGGTC TATGTGGCAG GGGCCGGCCC GGTCGGGCTT
GCCGCGGCGG CATCGGCGCA CCTGCTGGGG GCCGCGGTGG TCATGATCGG GGACTTCAAC
CAGCAGCGCC TGGAACATGC CCGCAAGATG GGCTTCGAGC CCATCGACTT GAGCCGTCAC
GATCGCCTGG GCGAGATGAT CGCCGCCGTG GTGGGCGAGC CGAAGGTCGA CAGTGCCATC
GACGCCGTGG GCTTCGAGGC CGTGGGCCAT GGCGGCAAGG AACAGCCGGC GGTGGTGCTC
AACCAGATGA TGGAAGTGAC TCGTGAAGCC GGCTCGATCG GCATCCCCGG GCTCTATGTC
ACCGAGGATC CCGGTGCCGC CGAGAAGGCG GCCCAGAGCG GCAATCTCAG CCTGCGCTTC
GGCCTGGGCT GGGCCAAGGG ACATTCCTTC CATACCGGGC AGACGCCGGT GGTGCAATAC
AATCGCCAGT TGATGCAGGC GATCCTGCAC GGGCGGCTCA ATATCGCCGA GATCGTCAAC
GCCCAGGTCA TTTCCCTGGA AGATGCACCG CAGGGCTATC AGCAGTTCGA CTCCGGCGTG
GCCAGCAAAT TCGTGCTGGA TCCGCATGGG CTGCTTGGCG CGGCGTGA
 
Protein sequence
MANNRGVVYT GPGKVEVQDI AYPKMQAPSG KAIEHGVILK VVSTNICGSD QHMVRGRTTA 
PAGMVLGHEI TGEVIEKGKD VEFLDIGDLV SVPFNVACGR CRTCKEGHTG LCLHVNDERA
GGAYGYVDMG GWVGGQAHYV MVPYADFNLL KFPDRDQAMD RIRDLTMLSD ILPTGFHGAL
NAKVGAGSTV YVAGAGPVGL AAAASAHLLG AAVVMIGDFN QQRLEHARKM GFEPIDLSRH
DRLGEMIAAV VGEPKVDSAI DAVGFEAVGH GGKEQPAVVL NQMMEVTREA GSIGIPGLYV
TEDPGAAEKA AQSGNLSLRF GLGWAKGHSF HTGQTPVVQY NRQLMQAILH GRLNIAEIVN
AQVISLEDAP QGYQQFDSGV ASKFVLDPHG LLGAA