Gene Csal_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0328 
Symbol 
ID4026643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp365604 
End bp366716 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content69% 
IMG OID637965477 
Productmethylitaconate delta2-delta3-isomerase 
Protein accessionYP_572389 
Protein GI92112461 
COG category[S] Function unknown 
COG ID[COG2828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0480492 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA CGCGCATCCC GTGTCTGCAG ATGCGCGGCG GCACCTCGAA GGGGCTGTAC 
TTCCTCGCCG AGGACCTCCC CCGCGACACC GCCCGGCGCG ATGCGGTATT GCTCGCCGCG
ATGGGCTCGC CCGATGCGCG TCAGATCGAC GGCCTGGGCG GGGCGACCTC GCTGACCAGC
AAGGTCGCAA TCGTCGACCG TCCGACCCGG GACGACGTGG ATGTGGATTA TCTTTTCGCC
CAGGTCGTCG TCGACGCCCC GCGCGTCGAC TATGGCCAGA ACTGCGGCAA CATCCTCGCC
GGCGTCGGCC CCTTCGCCAT CGAGCGCGGC TGGGTGACGG CATGCGACGG CACGACGCCG
GTACGCGTGC ACATGGTCAA CACCGGCCAG GTGGCGATCA TCCATGTCCC GACCCCCGGC
GGTAGCGTCG CGTACGCCGG CGACGCCCAG ATTTCCGGCG TGCCGGGCAG CGCCGCCCCC
TTGATCGTCG AATTCCAGGA TACCGCCGGC TCGAGCTGTG GCGCCCTGCT GCCCACCGGC
CACCCCCGCG ACACCGTCGA AGGCATCGAC GTGACCTGTC TCGACAACGG CATGCCGGTG
GTCCTGCTGC GTGCCGAAGA TCTCGGCGTC AGCGGTCACG AAAGCTGCGC CGACCTGGAG
GCCAATACCG CGCTGCGTGA ACGCCTCGAA CGCATCCGCC TGGCGGTGGG GCCGCGCATG
AATCTGGGCG ACGTCAGCGA ACGCACCGTG CCCAAGATGA CCCTCATCGC CGCGCCTCGG
CATGGCGGCA GCCTCGCCAC GCGCTCGTTC ATTCCGCATC GCTGCCACGA GGCCATCGGC
GTACTCGGTG CGGTCAGCGT GGCCAGCGGC TGCCTGGTAC CGGGCACCGT GGCCGACGGG
CTGGCGGTGC TGAACGAGGG ACCGACACAG CGCCTGTCGA TCGAGCACCC GACCGGCGAG
TTCACCGTCG AGTTGACCCG TGACGCGGAC GGCGAGATCG TCCGCGCGGG ACTGCTGCGC
ACCGCCCGAC TGCTCTTCGA AGGCCACTTG CATGTGCCGC GTGCCGTCTG GAATGGCGAC
ACCGCGGCCC ACTCCAACGG AGCCGCTTCA TGA
 
Protein sequence
MSQTRIPCLQ MRGGTSKGLY FLAEDLPRDT ARRDAVLLAA MGSPDARQID GLGGATSLTS 
KVAIVDRPTR DDVDVDYLFA QVVVDAPRVD YGQNCGNILA GVGPFAIERG WVTACDGTTP
VRVHMVNTGQ VAIIHVPTPG GSVAYAGDAQ ISGVPGSAAP LIVEFQDTAG SSCGALLPTG
HPRDTVEGID VTCLDNGMPV VLLRAEDLGV SGHESCADLE ANTALRERLE RIRLAVGPRM
NLGDVSERTV PKMTLIAAPR HGGSLATRSF IPHRCHEAIG VLGAVSVASG CLVPGTVADG
LAVLNEGPTQ RLSIEHPTGE FTVELTRDAD GEIVRAGLLR TARLLFEGHL HVPRAVWNGD
TAAHSNGAAS