Gene Csal_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0320 
Symbol 
ID4026635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp359068 
End bp360006 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID637965469 
ProductL-threonine ammonia-lyase 
Protein accessionYP_572381 
Protein GI92112453 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGATG TCCAGCATGC GCGGGAACGG ATCGCCGAGG CCCTCGCGCC GACACCGTTG 
TTGCTCGACC AGACGCTGTC CGAGCGTCTG GGACGGCGTG TGTGGCTCAA GGTCGAGTCA
TTTCAGCACA CCGGCTCCTT CAAGGCACGC GGTGCGCTGA ACTGGCTGCG CACCGCCAGC
GACGAGGAAC TCGCCGGCGG GCTGGGCGCC GTGTCCGCCG GCAACCACGC CCTGGCGCTG
GCCTGGGCAG CACGCCGGAC AGGCGTCCCC GTGACCATCG TGATGCCCGA GAATGCCAGC
CCCTTCAAGG TGGAGGGCAG CCGCGCGCTG GGCGCGGAGG TCATCCTGCA CGGCGATATC
AACGCGGCCT GGGCCTTGAT GCATCGATTG GTCGAGGAGC GCGGCCTGAC GCTGGTGCAT
CCCTACGACG ATCCGCGCAT CATCGCCGGC CAGGGCACGC TGGGCCTCGA GAGTCTCGAG
CAGGCGCCGG ACGCCCAGGC GATTCTCTGT CCCGTCGGCG GCGGCGGCCT GATCGGGGGC
ATCGGCGTGG CATCTTCGGC GTGGCGGCCC GAGCTCTCGC TGATCGGCGT GGAGCCCCGC
GGAGCGGCGA GCATGGCGCA TGCCTGGTCC CAGGGCGGCC CCGCCAGGCT CGACGGTATC
GCCAGCTGCG CCAAGAGTCT CGCTGCCGCC ATCGTCGGCG AGCACACCTA CCCGCTCAGT
CGCCGGCACG TCACCGAGCT CGTCGCGGTG GACGAGGACG CCATCCACCG CGCCATGCGC
CACTTGCTCT ACCAGGCCAA GTTGGTCGTC GAGCCCGGCG CGGCCGTGGG GGTGGCCGCT
CTGCTCGAAG GTGGCGCCAC GCTGCCCTCG CATGGCGATG TCGTCGTGGT GGTGACCGGT
GGCAATCTGG GAGGCGAGGA ACTGGCCGAA TTCCTGTAG
 
Protein sequence
MSDVQHARER IAEALAPTPL LLDQTLSERL GRRVWLKVES FQHTGSFKAR GALNWLRTAS 
DEELAGGLGA VSAGNHALAL AWAARRTGVP VTIVMPENAS PFKVEGSRAL GAEVILHGDI
NAAWALMHRL VEERGLTLVH PYDDPRIIAG QGTLGLESLE QAPDAQAILC PVGGGGLIGG
IGVASSAWRP ELSLIGVEPR GAASMAHAWS QGGPARLDGI ASCAKSLAAA IVGEHTYPLS
RRHVTELVAV DEDAIHRAMR HLLYQAKLVV EPGAAVGVAA LLEGGATLPS HGDVVVVVTG
GNLGGEELAE FL