| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0318 |
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| Symbol | |
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| ID | 4026633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 356584 |
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| End bp | 358389 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637965467 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_572379 |
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| Protein GI | 92112451 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.899318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGATG GAGGTCGTGT GAGCTCTAAG GGAATATTTA CTTCGGAAGA AAAAGAAAAG
TTAAAGGGTA TGTATGAGTC ACGGTTGTCC CGCCTGGGCC CGAGCCATGC GCTGGACTGC
CTTACTCAAC TTGCCTCTAG CGTCATTGGT GTGCCTACCA GCTTGGTGAC GTTACTGGGG
CCTGACGTGC AATGGATAAA ATCACGGTAT AATTTTGGGT TGGATGTTAC GCCTTTGGAA
TCGTCTTTCT GCCGGCGAAC AGTTCAGCGT AAAGACCTGA CCATTATAGA AGATGCGCTG
GATGATGATG AGTTCAAATG CAATGATCTC GTTAATTCAG CGCCGTATGT CAGGTTTTAT
GCGGGCGCGC CGCTTTTTGA CTCGGAAGGT GCCGCTATTG GTGGCGTATG TGTTATCGAC
TATGAGCCTA GGAAACTCTC CGACAAAGAA GCTGAGATGC TCAGGGCTTT TTCCGTGATT
GCTAGCAATC TTCTGGAGTC GAGCAATAAT GTTGGGTTTG TTGATTCCGT GACATTCCTC
CCTAACCAGC AAAGGCTTAT GAGGGATTTA GACGCGCTTC ATGCCCGTCA GGATGAAGAT
CATGTGCTTC CAAAAACAGT TATTGTTTTA GAAGTGGTGT CCACTAGTGG TTATCATGAG
CTTGCAAAGA GTTATGGGGT TGAGGCGGTT GAAGAGGTTT CAAAAAATAT CGCGGATCTT
CTGAGAGTTT GTCTCTCGGA GCGTCATTTG CTTTATGCTG TAAGTCTTTC TCGTTTTTCC
GTATTGGTGC CCCAGTCGGA GAGGGGGGCG GTGATTGATA TAGTGGCGGC ACTCAACTTC
CGTATTGGAG CGGGAGGAAA TACGGCACTG CCTGTCAATC TACAGGTTTG TGCCGGATAT
TATGATTTTG ATCCATTGGC CATTGCGCCG AGGGATACTT TTAGGAGAGC TCTCAGTGCA
TTATATGAAG CGCTAGCCTA TCGTGAGCCA GTTATGGCAT ACCAAGTCAA CTTTGATAAT
GCACAGCAAC GCAAAGTGAA GTTGATCAAC AGCTTGCCGG AAGCTTTGGA GGATAGGCAG
CTGTATCTTA TGGTACAGCC TAAGATTAAT ATGAGGAGTG GTGAAGTAGT AGGGCTGGAA
GCCTTATTGA GGTGGAGGCA CCCTGAGTTT GGAGAGCTGT CTCCAATGGA GTTTGTCCCC
CTTGTTGCTC AGACATATAT GGTTAATGAC CTGACGCACT GGGTTGTTAG AGAGGCGCTT
GGGATAATAA GTCGGTTTCA TGAGAAAGGT TGTTATCTTA CTATTTCCGT TAATGTGACA
ACGACAAATC TGTTTGATGA TTCTTTTTTT AATTGTGTCG AGTCAATGCT TGGTGAGTTT
GGTGTCGACC CCAAGTATCT TGAAATTGAG TGTTTGGAAA CAGAAGAGTT GTTAGAGGAT
TATCGAATAG CGAGCGTGTT GCAGGCCCTT CGTGATATAG GGGTTCGTAT TGCCCTGGAC
GATTTTGGAA GTGGTTATAG TAATCTTAAT TACCTCCGCC GGATTCCGGT CGACGTGGTG
AAGATTGATC GAAGTATCAT TAAGGATATG GAGGTTGATG CAGGGAGCCG TGCTATCGTT
TTTAGGCTGG TTCAGATTTT GAAACACTTT GACTACGGCA TCGTTGCTGA GGGGATAGAG
AATCAGGCCA CAGCTGATCA GCTACTGCAG TTTGGTTGCG TGGTTGGGCA GGGTTACTAT
TTTTATCGTC CCATGATATG GGAGAAAGCT CTGGAGTCTT TTGCTCAATG TTTGCCTTCT
TCTTGA
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| Protein sequence | MVDGGRVSSK GIFTSEEKEK LKGMYESRLS RLGPSHALDC LTQLASSVIG VPTSLVTLLG
PDVQWIKSRY NFGLDVTPLE SSFCRRTVQR KDLTIIEDAL DDDEFKCNDL VNSAPYVRFY
AGAPLFDSEG AAIGGVCVID YEPRKLSDKE AEMLRAFSVI ASNLLESSNN VGFVDSVTFL
PNQQRLMRDL DALHARQDED HVLPKTVIVL EVVSTSGYHE LAKSYGVEAV EEVSKNIADL
LRVCLSERHL LYAVSLSRFS VLVPQSERGA VIDIVAALNF RIGAGGNTAL PVNLQVCAGY
YDFDPLAIAP RDTFRRALSA LYEALAYREP VMAYQVNFDN AQQRKVKLIN SLPEALEDRQ
LYLMVQPKIN MRSGEVVGLE ALLRWRHPEF GELSPMEFVP LVAQTYMVND LTHWVVREAL
GIISRFHEKG CYLTISVNVT TTNLFDDSFF NCVESMLGEF GVDPKYLEIE CLETEELLED
YRIASVLQAL RDIGVRIALD DFGSGYSNLN YLRRIPVDVV KIDRSIIKDM EVDAGSRAIV
FRLVQILKHF DYGIVAEGIE NQATADQLLQ FGCVVGQGYY FYRPMIWEKA LESFAQCLPS
S
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