| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0312 |
|---|
| Symbol | |
|---|
| ID | 4025968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 351950 |
|---|
| End bp | 352582 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637965462 |
|---|
| Product | protocatechuate 3,4-dioxygenase, alpha subunit |
|---|
| Protein accession | YP_572374 |
|---|
| Protein GI | 92112446 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02423] protocatechuate 3,4-dioxygenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.790918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGC CGAATTCCCA GCCCAGCGCC GCGCTCATGC TGCGCGAAAC CGCGTCGCAG
ACGGCCGGTC CCTACGTGCA CATCGGCCTG GCCCTGGATA TCGCCGGCCT GCCGCCGCGC
GAGGAAGAGA TCTGGAACCG CCTGGCATCG CCGCAGGCCG AGGGACAGCC CATCGAGCTG
GTGGGGCGGG TCATCGACGG CAACGGTGAC CTGGTGCGCG ATGCCTTGCT GGAAGCCTGG
CAGGCCGATG CCCAAGGCCA CTATCAGTGC GAGTTCGACC TGCAGGCGCC GTTCAACAGT
TTCGGACGCA CCGCGACCAC GGTGGAAAAC GATGGCGAGT GGTGCTTCCA CACCATCAAG
CCGGGCCAGG TCGCGCGTCG CGACGGACGC ATGATGGCAC CGCACGTCAC GCTCGCCGTG
TTCGCGCGCG GCATCAACAT GCAATTGCAC ACACGGCTGT ACTTCGAGGA CGAAGCCGAG
GCCAACGCGG CTTGCCCGGT GCTCAATGCG GTGGAATCCC CCACGCGCCG TCAGACCTTG
ATCGCCAAGC GCGAAGAGAG CGAAGGCAAG GTGCGCTATC GCTTCGATAT CCGGCTGCAG
GGCGAAGGGG AGACGGTGTT CTTCGACTTC TGA
|
|---|
| Protein sequence | MQQPNSQPSA ALMLRETASQ TAGPYVHIGL ALDIAGLPPR EEEIWNRLAS PQAEGQPIEL
VGRVIDGNGD LVRDALLEAW QADAQGHYQC EFDLQAPFNS FGRTATTVEN DGEWCFHTIK
PGQVARRDGR MMAPHVTLAV FARGINMQLH TRLYFEDEAE ANAACPVLNA VESPTRRQTL
IAKREESEGK VRYRFDIRLQ GEGETVFFDF
|
|---|
| |