| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0305 |
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| Symbol | |
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| ID | 4025961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 343861 |
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| End bp | 345147 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637965455 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_572367 |
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| Protein GI | 92112439 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.805991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAGTG AAATGATTGG CGGTATCGGC CTGGCCTTGC TGCTGGTGCT GATGATGCTG
CGCGTGCCGG TGGCGCTGAC GATGCTCATC GTCGGGGTGG TGGGTTTCTC GCAGGTCATC
AACATGGGCG CGGCCCTGTC GATGGTCAAA TCCGTGCCCG TGGAGGTGCT GTCGAACTAC
AGCTTCAGCG CGGTGCCCAT GTTCATCCTC ATGGGCGTGC TGGCCGCGCA TTCGGGCATG
GCCGGGAAGC TGTTCAATTC CACCCGCGTC ATCTGTGGCG GCTGGAAAGG CGGCCTGGCC
ATCGCGGCGA TCGGTTCTTG CGGCATCTTC TCGGCGATTT CCGGCTCCTC CCTGGCTACC
GCGAGCACCA TGACCCGCGT CGCCCTCCCG GAGATGGAGC GTTACGGCTA CAACCGTGGC
CTGGCGACAG GGGCGCTGGC CGCCGGCGGC ACGCTGGGCA TCATGATTCC GCCGAGCATC
GCGCTTTTGA TCTACGCCAT CCTGACCGAG CAATCGGTGG GCGACATGTT CATGGCGGGG
CTCATTCCCG GCCTGATGGG GCTGTTGTTC TATTCGCTGG CGATCACGGT GGTGATGCGG
CTCAAGCCGT CGTTGGCCGT GGCCGGCGAA TCCACCACCT GGAGCGAGAA GGTCAAGTCC
CTGGTGGGCC TGGTGCCGTT CTTCGGTGTC TTCCTGCTGC TCATCCTGGG GATCTATTTC
GGTGCCTTCA CGCCCACCGA GGGGGCGAGC GTCGGGGCCT TCGCCACCTT GCTGTATGCC
GTGGCCAAAG GCATGCGCGC CCGGGGCTTG TGGCAGTCGG TACAGGAAAC GCTGGCGCTT
TCCTCGGTCG TCTTCTTCAT GCTGGTCGGG GCCGAGACGC TGGGCTATTT CATCTCGGTA
TCGCGGATCT CCTTCACCAT CAGCGATTTC CTGTTCAGCC TGGATCTCAC TCCGATCGTC
GTGCTGCTGT GCATCCTGCT GCTGTACTTC GTGCTCGGCA TGTTCATGGA CTCCATCGCC
ATGCTGGTGA TCACCGTGCC GGTGGTGTTT CCGATCATTC AGAGCGTGGG CATCGACCCG
GTCTGGTTCG GCATCGTGAC GGTACTGACC GTCGAGCTGG GCTTGATCAC GCCGCCAGTG
GGAATGAACG TCTTCGTCAT CAAGGCCATG GCTCCCCACG TGGGGTTGGG CGAGATCTTC
AAGGGGGTCG CGCCCTTCAT CGCCGCCGAT TTCGTGCGCC TGGCGCTATT GATCGCATTT
CCCGTACTCA GTCTGTTTCT CATCTGA
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| Protein sequence | MGSEMIGGIG LALLLVLMML RVPVALTMLI VGVVGFSQVI NMGAALSMVK SVPVEVLSNY
SFSAVPMFIL MGVLAAHSGM AGKLFNSTRV ICGGWKGGLA IAAIGSCGIF SAISGSSLAT
ASTMTRVALP EMERYGYNRG LATGALAAGG TLGIMIPPSI ALLIYAILTE QSVGDMFMAG
LIPGLMGLLF YSLAITVVMR LKPSLAVAGE STTWSEKVKS LVGLVPFFGV FLLLILGIYF
GAFTPTEGAS VGAFATLLYA VAKGMRARGL WQSVQETLAL SSVVFFMLVG AETLGYFISV
SRISFTISDF LFSLDLTPIV VLLCILLLYF VLGMFMDSIA MLVITVPVVF PIIQSVGIDP
VWFGIVTVLT VELGLITPPV GMNVFVIKAM APHVGLGEIF KGVAPFIAAD FVRLALLIAF
PVLSLFLI
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