Gene Csal_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0302 
Symbol 
ID4025958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp341040 
End bp342209 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content68% 
IMG OID637965452 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_572364 
Protein GI92112436 
COG category[R] General function prediction only
[S] Function unknown 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase
[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0830882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTCT TGACGGTGGC GGAGCGCACG ATCGCCTATC GCGACAGCGG TGAAGCCGCG 
CTGCCGGCGG TGCTGCTGGC ACACCCGCTG GGCATGAGCC AGGACGTATG GGAGGACGTG
GTCGCCGCCT TGCGTGGTCG TTTCCGCTGC GTGACCTGGG ATCTGCCTGG CCATGGCGCC
AGCAGTGGCC TGACCGAGGC GGTCACGCCC CGCGCGCTGG CCGAAGACGC CCTGGCCCTG
GCCGATGCGC TGGGGGTGGC GCGTTTTCAT TTCGTGGGCA CCTCGATCGG CGGCGTGGTC
GGTCAGCAGC TGCTCATCCA GTGTCCCGAA CGCCTCGCCG ATGTCGTGCT GACCAACACC
GGCGCGGTCA TCGGCACCCC GGACAACTGG CATGCGCGGG CCTCGCGCGT GCGCCAGGAA
GGTCTGGCCG CCATGGCCGA CGAGATCGTT CCGCGCTGGT TTTCCGAGGC ATTCGCGCAA
GGCAATGCGG CAACCTACAC GGGCTGGAAG ACCCAGCTTG CGCGTACCGA TGGCGAGTCC
TACGCGCGGC TTTGCGAGAT GCTGGCCGAC ACCGACTTCA GCGGACAACT GCGCGGGGTC
GCGGGGCCGG TGCGCTTGCT CGGGGGACGC GAGGACCTCT CCACGCCGCC CGATACCCTG
AAAGCGCTGG CCTCTCAGTT CGGCGATGCG CGCCTCGAGG TGCTCGAAAG CATCGCCCAT
GTGCCGAGCG TGGAAGTTCC CGAGGCCGTG GCCAAGCGAC TGCGTACCTG GCTGGGCGAC
GCTCCCGTCG GGGCCGAGGG CGTGAGCTAC GCGGCCGGTC TGGAAACGCG CAAGCAGGTG
CTGGGCGAGG CGCATGTCGA GCGCGCCAGC GAGAACGCCA CCACGCTTGA TGCGCCCTTC
CAGAACATGA TCACGCGTCT GGCCTGGGGC GAGTTGTGGG GCAACGACGA CTTGAGCCGT
ACCGAGCGCA GTATGATCAC CCTGGCGGTG CTGGCGGCGC TGGGGCGCGA CGGTGAACTG
GAGTTGCACC TGAAGACGGC GCAGCGCATC GGCCTGAGCG AAGCGCAGCT GCGTCAGGCG
CTGATGCATG TCGCGATCTA TGCCGGCGTG CCGGCCGCCA ACCATGCCTT CGCGATGGCC
AAGAAACTGG GCTGGGGCAA TAGCCTGTAA
 
Protein sequence
MAFLTVAERT IAYRDSGEAA LPAVLLAHPL GMSQDVWEDV VAALRGRFRC VTWDLPGHGA 
SSGLTEAVTP RALAEDALAL ADALGVARFH FVGTSIGGVV GQQLLIQCPE RLADVVLTNT
GAVIGTPDNW HARASRVRQE GLAAMADEIV PRWFSEAFAQ GNAATYTGWK TQLARTDGES
YARLCEMLAD TDFSGQLRGV AGPVRLLGGR EDLSTPPDTL KALASQFGDA RLEVLESIAH
VPSVEVPEAV AKRLRTWLGD APVGAEGVSY AAGLETRKQV LGEAHVERAS ENATTLDAPF
QNMITRLAWG ELWGNDDLSR TERSMITLAV LAALGRDGEL ELHLKTAQRI GLSEAQLRQA
LMHVAIYAGV PAANHAFAMA KKLGWGNSL