| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0282 |
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| Symbol | |
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| ID | 4027052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | - |
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| Start bp | 318941 |
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| End bp | 320263 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637965432 |
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| Product | TRAP dicarboxylate transporter- DctM subunit |
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| Protein accession | YP_572344 |
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| Protein GI | 92112416 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.717533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGTCAC CGATCACACT GGGCACGGGC GGTTTCGTTC TGCTGCTGAT CATGATGGCG
GCCAGGATCC CCATCGGGCT GTCGATGCTG GTCGTCGGCG CCGCCGGTTC GATGTTGATC
ACCGGACCGA TGGGCATTCT GAATGGCTTG AAGACACTCC CCTACGAGCA TTTCTCGAGC
CATACGCTGT CGATCATTCC TCTCTTCCTG CTGATGGGCC AGTTCGCCGC GCGGGCCGGG
CTCTCGCGGG CCATGTTCCA GGCCGCCAAC GACTGGCTGG GCCATCGGCG CGGCGGGCTC
GCCATGTCGA CGATCGGCGC CTGCGGTGCC TTCGGTGCCA TCTGCGGGTC GTCGCTGGCC
ACCGCCGCCA CCATGACGCA AGTGGCACTG CCGGAAATGG AGCGCCAGGG CTATCGCGGG
AGCCTGGCCA CCGGCGCGCT CGCGGCGGGC GGCACGCTGG GCATTCTGAT TCCTCCCTCG
GTGGTGCTGG TCATCTACGC CATCCTGGCG GAACAGAACA TCAACGAGAT GTTCGCCGCC
GCCCTGGTAC CGGGCCTGTT CGCGGCCTTC AGCTACATGC TGGCGATTTC CCTGTACGTG
CGCTTCTTTC CCGCCAGCGC GCCGAACAAG GACAAGGCAT CGCGCGGCGA ACGCTGGCGC
TCGCTGTGGG AAGTCTGGCC CGGCGCGGCG ATCTTCATCA TCGTGATCGG CGGCATCTAC
ACCGGCATCT TCACGCCGAC CGAGGCCGCC GCCGTCGGCG CGGCGGCCAC CGGGGTCCTG
GCGATCACCC GGGGCGGACT GCGCTGGAAC GGTCTACGCG ACTGCCTGCT CGAGACGGCC
GTCACTTCGG CGATGATCTT CTTCATCGTC CTCGGGGCCA GCGTGTTCAA CAGCTTTCTT
GCCCTGACCC AGTTGCCGCA AATCACGGCC GGCTGGATCG TGGGCCTGGA GATCAGCCCC
TGGGTCGTGC TGGCCGGCAT CCTGCTGTGC TATCTGATCC TCGGCTGCTT CATGGACAGC
CTGTCGATGA TTCTGCTGAC GGTGCCCATC TTCCTGCCCA TCGTCACGGG CATGGACTTC
GGCATGCCCG CCGCGGACGT GGCGATCTGG TTCGGCATCC TGGCACTGGT GGTGGTCGAG
GTCGGTATGA TCACGCCGCC CGTGGGGCTG AATATCTTCA TCATTCACTC CATGGCGCCC
CACGTGCCGC TGACCGAGAC CTTCAAGGGC ATCCTGCCGT TCCTGGCCGC CGACGTCATC
CGCATCGTGA TGCTGGTGGC CTTCCCGGCC ATTACGCTCG GCTTCGTCTA CCTGCTTTAT
TGA
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| Protein sequence | MMSPITLGTG GFVLLLIMMA ARIPIGLSML VVGAAGSMLI TGPMGILNGL KTLPYEHFSS
HTLSIIPLFL LMGQFAARAG LSRAMFQAAN DWLGHRRGGL AMSTIGACGA FGAICGSSLA
TAATMTQVAL PEMERQGYRG SLATGALAAG GTLGILIPPS VVLVIYAILA EQNINEMFAA
ALVPGLFAAF SYMLAISLYV RFFPASAPNK DKASRGERWR SLWEVWPGAA IFIIVIGGIY
TGIFTPTEAA AVGAAATGVL AITRGGLRWN GLRDCLLETA VTSAMIFFIV LGASVFNSFL
ALTQLPQITA GWIVGLEISP WVVLAGILLC YLILGCFMDS LSMILLTVPI FLPIVTGMDF
GMPAADVAIW FGILALVVVE VGMITPPVGL NIFIIHSMAP HVPLTETFKG ILPFLAADVI
RIVMLVAFPA ITLGFVYLLY
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