| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0245 |
|---|
| Symbol | |
|---|
| ID | 4029190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 278829 |
|---|
| End bp | 279926 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637965396 |
|---|
| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
|---|
| Protein accession | YP_572308 |
|---|
| Protein GI | 92112380 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGG ATAATGGACG GGCCATGCCG GAACCTTCCC AGCAGCAGTT TCTCGAACAG
CAGCGCCTGC TCGAACATTT GACGACCGCC GTGGTACTGC TCGACGGCGA GCTGCGGCTG
CGTTGGATGA ACCCCGCGGC CGAGTCGCTG CTGGCGACCA GCCGGGTGCG GGTCGTCGGC
CAGTGTCTGG AGAGCCTGGC GGGCGTCGAG GGCAGTGTCG AGGCGGTGTT GATCAAGGCG
CGCGACGAGC TGCATCCCTT CACGCAGCGC GAGGCGACGC TGGTATTGCC GTCGGGGGAT
ACGGCCACGG TGGACTTCAC CGTCACGCCG TTGTCCGCCG ATGAACTGCT GATCGAGATC
GAGCCGCGCG ACCGGCTGTT GCGCATTTCC CGCGAGGAGG CGCTGATCGC GCGCCAGGAG
ACCATCAAGG TGCTCACCCG GGGGCTGGCG CACGAGGTGA AGAACCCGCT GGGCGGCATT
CGCGGTGCGG CGCAGTTGCT CGAGCGAGAC CTGCCCGATC CGCAGCTCGC CGAGTTCACC
CGGGTCATCG TCGAAGAGGC CGATCGGCTG CGCGATCTGG TGGATCGCAT GCTGGGGCCC
AACAGCATGA GTCGTCACGA GCCGCTCAAC ATTCACAAGG TGCTCGAGCG GGTGCGTACC
CTGCTGGAGG CCGAACATCC GCGCATCGAC TACGTGCGCG ATTACGACCC CAGCCTGCCG
GATCTGGAAG GTGACGAAGC GCAGCTGATT CAGGCGGTGC TCAACGTCGC CCGCAACGCC
GTGCAGGCCA TGGAGGAACA CGGCGTCGAG ACGCCCCGGC TGATTCTGCG CACGCGGGCG
CGACGCCAGT TCACGCTGGG CGCCGAGCGC CACCGGCTGG TCTGCGAGCT GGGCATTCTC
GACAACGGCC CCGGCATTCC CGAGACGCTG CGCGAGACGC TGTTCTATCC GATGGTGTCG
GGGCGTGCCG AGGGCAGTGG CCTGGGGCTG TCCATCGCCC AGTCGATCCT GCATCAGCAC
CAGGGGTTGA TCGAGTGCGA CTCGGTGCCC GGGTGTACCG AATTCCGCTT GTTGATTCCG
CTTGAGAGCC ATCATTGA
|
|---|
| Protein sequence | MTMDNGRAMP EPSQQQFLEQ QRLLEHLTTA VVLLDGELRL RWMNPAAESL LATSRVRVVG
QCLESLAGVE GSVEAVLIKA RDELHPFTQR EATLVLPSGD TATVDFTVTP LSADELLIEI
EPRDRLLRIS REEALIARQE TIKVLTRGLA HEVKNPLGGI RGAAQLLERD LPDPQLAEFT
RVIVEEADRL RDLVDRMLGP NSMSRHEPLN IHKVLERVRT LLEAEHPRID YVRDYDPSLP
DLEGDEAQLI QAVLNVARNA VQAMEEHGVE TPRLILRTRA RRQFTLGAER HRLVCELGIL
DNGPGIPETL RETLFYPMVS GRAEGSGLGL SIAQSILHQH QGLIECDSVP GCTEFRLLIP
LESHH
|
|---|
| |