Gene Csal_0239 details

Gene Information

• Locus tag: Csal_0239
• ID: 4029184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: -
• Start bp: 271846
• End bp: 273672
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637965390
• Product: GTP-binding protein TypA
• Protein accession: YP_572302
• Protein GI: 92112374
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCGAGA ATCTTCGCAA CATTGCTATC ATCGCCCACG TCGACCATGG CAAGACCACC 
CTGGTCGACA AACTCCTGAG TCAGTCCGGC ACCCTCGACC GCAAGGCCGA AGGGCAAGAG 
CGCATCATGG ACTCCAATGA CCAGGAGAAA GAGCGCGGTA TCACCATTCT GTCCAAGAAC 
ACCGCGATCC GCTGGCAGAG CCCGGACGAA CGGGACTATC ACATCAACAT CGTCGACACC 
CCCGGACACG CCGACTTCGG CGGCGAGGTC GAGCGCGTGA TGTCGATGGT CGACTCCGTG 
CTGCTGCTGG TGGATGCCGT CGACGGCCCC ATGCCGCAGA CGCGCTTCGT CACCCAGAAG 
GCCTTCGACC GTGGCCTCAA GCCGATCGTC GTGGTCAACA AGATCGACCG TCCCGGCGCG 
CGCCCGGACT GGGTCATCGA CCAGATCTTC GACCTGTTCG ACAACCTCGG CGCCACCGAG 
GAACAGCTCG ACTTCCCGAT CATCTACTGC TCGGCGCTGG ACGGCGTCGC CGGTCATGAG 
CCGGATCAGC TGGCCGACGA CATGACCCCG ATGTTCAAGT CCATCGTCGA CATCGTCGAA 
CCGCCCAAGG TCGAGCTCGA CGCACCGTTC CAGATGCAGA TCTCCGCGCT CGACTACAAC 
AGCTACGTCG GCGTCATCGG CCTGGGCCGC ATCAAGCGCG GCAGCGTGCG TCCGGGTCAG 
CAGATCAGCG TGATCTCCAA GGAAGGCAAC GTCCGCAAGG GCAAGGTCGG CCAGGTCATG 
ACGCACCTCG GCCTCGAGCG CGTGCAGACC GAAGAAGCCA GCGCCGGCGA CATCATCTGC 
ATCACCGGCA TCGACGACCT GGCGATCTCC GATACGCTGT GCGATCCGGC CGCCGTCGAA 
GCCATGCCGG CACTCACCGT GGACGAGCCC ACCGTGTCCA TGACCTTCCA GGTCAACGAC 
TCGCCGTTCG CCGGCAAGGA AGGCAAGTTC GTCACCAGCC GCAACATCAA GGAGCGCCTC 
GAGCAGGAAC TGATCCACAA CGTGGCACTG CGTGTCGAAC AGGGCGATTC GCCGGAGAAG 
TTCACCGTCT CCGGGCGTGG CGAACTGCAC CTTTCGGTGC TGATCGAATC CATGCGCCGT 
GAAGGCTACG AGCTGGCCGT GGGCCGTCCC GAGGTGATCA TCCGCGAGAT CGACGGCGTC 
AAGCAGGAGC CGTACGAAGA GGTCATCATC GACTGCGAAG AGCAGCACCA GGGCGCGGTG 
ATGGAAGAGC TCGGCTACCG CAAGGGCGAG ATGACCAACA TGAATCCGGA CGGCAAGGGT 
CGCGTTCGCC TGGACTTCAT CATCCCCGCA CGCGGGCTGA TCGGCTTCCG TGGCCAGTTC 
CTGACGCTGA CCTCCGGCAC CGGCATCCTG ACCAGCCGCT TCGACCATTA CGGCCCGCTC 
AAGCCCGATG CCTCCATCGA GCGTCGCAAC GGCGTGCTGG TCTCCATGGT CTCCGGCAAG 
GCGCTGGCCT ACGCGCTGTT CGCCCTGCAG GACCGTGGCA AGCTCATCGT CGAGCACGGC 
ACCGAGGTCT ACGAAGGCAT GCTGGTCGGC ATCAACAACC GCGCCGACGA CATGGCGGTC 
AACCCGACCA AGGCCAAGAA ACTCGACAAC ATGCGCGCCT CCGGCAACGA CGAGAACCTC 
GTCCTCACGC CGCCGGTTCG CTTCACCCTC GAACAGGCCA TCGAGTTCCT CGATGACGAC 
GAGCTGGTGG AAATCACGCC CCAGCACATC CGTCTGCGCA AGAAGCACCT CACCGAGAAC 
GAGCGCAAGC GCGCCAAGAA GAAGTAA 

 

Protein sequence

MIENLRNIAI IAHVDHGKTT LVDKLLSQSG TLDRKAEGQE RIMDSNDQEK ERGITILSKN 
TAIRWQSPDE RDYHINIVDT PGHADFGGEV ERVMSMVDSV LLLVDAVDGP MPQTRFVTQK 
AFDRGLKPIV VVNKIDRPGA RPDWVIDQIF DLFDNLGATE EQLDFPIIYC SALDGVAGHE 
PDQLADDMTP MFKSIVDIVE PPKVELDAPF QMQISALDYN SYVGVIGLGR IKRGSVRPGQ 
QISVISKEGN VRKGKVGQVM THLGLERVQT EEASAGDIIC ITGIDDLAIS DTLCDPAAVE 
AMPALTVDEP TVSMTFQVND SPFAGKEGKF VTSRNIKERL EQELIHNVAL RVEQGDSPEK 
FTVSGRGELH LSVLIESMRR EGYELAVGRP EVIIREIDGV KQEPYEEVII DCEEQHQGAV 
MEELGYRKGE MTNMNPDGKG RVRLDFIIPA RGLIGFRGQF LTLTSGTGIL TSRFDHYGPL 
KPDASIERRN GVLVSMVSGK ALAYALFALQ DRGKLIVEHG TEVYEGMLVG INNRADDMAV 
NPTKAKKLDN MRASGNDENL VLTPPVRFTL EQAIEFLDDD ELVEITPQHI RLRKKHLTEN 
ERKRAKKK