Gene Csal_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0236 
Symbol 
ID4027319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp269794 
End bp270540 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content69% 
IMG OID637965387 
ProductHAD family hydrolase 
Protein accessionYP_572299 
Protein GI92112371 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCCCG AGACTCCACC GCCGCTGCCG CGTCACGACT GGGCCCTGTT CCTGGACTTC 
GATGGCACCC TGGTGCCCCT CGCCGATCAC CCCCGTGATA CCAGCGTCTC GGAGGCTCTG
CGCCACCTGG TCGCCCGGCT CGCGCACGAA CTCGACGGTG CGGTGGCCAT CATCAGCGGT
CGCCCGGTCG CCGACCTCGA AGCTCTGCTC GCCCCGCTCG ACCTCCCCCT GGCCGGCGTT
CACGGCCTGG AGTGGCGCGA CACCTCGGGC GGCTACCACA GCGCCGTCGC ACACCCCGAG
CGGCTGGCCG CCTGCCGCGA CGCGCTGGCC GACTTCGTCG CCGGCCACGA CGGCCTGCAC
TACGAGGACA AGCGTGTCGC GCTGGCCCTG CACTACCGCG GTGCCCCGGA GCTTGCAGCC
GAATGCCGTC ATTTCATGGC CGAATGGCAG CAGGCGCTGG GCGACGACGT CGAGACCGTG
GCCGGCAAGT GCGTCATCGA ACTGCGCCCG GCCGGCGTTC ACAAGGGAAC CGCCATCGCC
CGGCTGCTCG ACGACCCGGT CTTCCAGGGC CGACGCCCCG TGTTCGTCGG CGACGACGTC
ACCGACGAGG ACGCCTTTCG CGAGGTCAAC GCACGCGGAG GCCTCAGCGT GCGCGTCGGC
GATGGGAAGA CGGCCGCGAC CTACTATCTT GAATCGGTAA AGAAGGTACT GACATGGCTG
GAACACCTAC CATCCCGTCC AACGTGA
 
Protein sequence
MMPETPPPLP RHDWALFLDF DGTLVPLADH PRDTSVSEAL RHLVARLAHE LDGAVAIISG 
RPVADLEALL APLDLPLAGV HGLEWRDTSG GYHSAVAHPE RLAACRDALA DFVAGHDGLH
YEDKRVALAL HYRGAPELAA ECRHFMAEWQ QALGDDVETV AGKCVIELRP AGVHKGTAIA
RLLDDPVFQG RRPVFVGDDV TDEDAFREVN ARGGLSVRVG DGKTAATYYL ESVKKVLTWL
EHLPSRPT