| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0230 |
|---|
| Symbol | |
|---|
| ID | 4027313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | + |
|---|
| Start bp | 261855 |
|---|
| End bp | 262637 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637965381 |
|---|
| Product | CRISPR-associated Cas5e family protein |
|---|
| Protein accession | YP_572293 |
|---|
| Protein GI | 92112365 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGAC ATCTGGTCTT TCGGCTCTAT GCGCCGATGG CGAGCTGGGG CGAAGCTGCG
GTAGGGGAGG CGCGGCCGAC CGCGACGTAC CCCGGGCGCG GCGCCATCCT CGGCTTGATC
GGCGCTGCAC TTGGCATCCG GCGCGACGAT GACGAGGGGC AACTAAGGCT TCGGCAAAGC
CTGGGCATCG CGGTCAAACA GCGCTCTCCA GGCTGGCTGC TACGCGACTA CCACACCGTG
CAGGTGCCAC CTTCACAATC GAAGGTGAAC TACCGTTCGC GGCGTGAAGA ACTTTCGGTG
CCCAAGGATG CCCTCAATAC CATTCTCTCT TCCCGGGACT ATCGCTGTGA TGGCCTGTGG
GTCGTGGCGC TGCGTCTGAT GCCCGACGCG GTCTGGACAC TGGACGAACT CAAGAGCGCG
CTGGAGAGGC CTCGCTTCAC GCTCTATCTC GGCCGTAAGG CATGCCCCCT GGCGGCACCG
CTCACGCCCG CCATCGTGGA GGCGGATCAC TGGCGCGGGG CGCTGGATCA CGGCTTTGAC
AGCGCAACCG ATCCCGAAAG GACATGGTTG CCGCTCATCG GTAACGAAGC ACAAGACCTA
CGCTTGCTGA GGCTGCCCGG TCAGGTGCTC TATGCCTGGG AAGGCGAGGC AGATGCACTA
GACGGTAACG CCGACATGGC GGAGTCCAGC GAGACCTGGG ATGAACCGCT GCATCGCCGC
CGCTGGCAGT TCGGGGCGCG TCTCGAGCAC CGCCGAATCG AGTCGGTGGA GGGGCAGAGC
TAA
|
|---|
| Protein sequence | MTGHLVFRLY APMASWGEAA VGEARPTATY PGRGAILGLI GAALGIRRDD DEGQLRLRQS
LGIAVKQRSP GWLLRDYHTV QVPPSQSKVN YRSRREELSV PKDALNTILS SRDYRCDGLW
VVALRLMPDA VWTLDELKSA LERPRFTLYL GRKACPLAAP LTPAIVEADH WRGALDHGFD
SATDPERTWL PLIGNEAQDL RLLRLPGQVL YAWEGEADAL DGNADMAESS ETWDEPLHRR
RWQFGARLEH RRIESVEGQS
|
|---|
| |