Gene Csal_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0208 
Symbol 
ID4027173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp231848 
End bp233053 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content62% 
IMG OID637965359 
Productputative regulator protein 
Protein accessionYP_572271 
Protein GI92112343 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCGG CAACGAAGCC TGAACGCCCC ATGAGACGTT CAGGCTTTTT TTGTGGGCTG 
GCTATGAAAC CTGAGATTGC TGTCGGGTTG CTCTATTCGA CGACCGGCAC TTATCAACGC
ATCAGCAACA ATGCACGTAG CGGCGCCTTG CAGGCGGTCG CCGATATCAA CGCCGACGCG
ACGTCTGGCG TGACGCTGGT GGCGCACGAG TACGATCCGC ATGGTGAGCT CGAAGCCTAT
CATCGGGGCG TCGAGGACTT GTTGGCACGG GGCGTGCGTC ACGTGGTGGG CACCACGACA
TCGGCGAGCC GCAAGGACAT CGTGCCGGAT GTCGAGCGTG ACGAGGCCCT GTTGTGGTAC
GCCTGCCCCT ACGAGGGATT CGAGTGCAGC GAGAACGTGC TCTATTCCGG CGGATGCCCG
AGCCAGAATC TGGTCCCATT GCTGGCCTAT GCCCTGCGCG AGCGCGGCAA GCGCGGCGTG
CTGATCGGCT CCAACTATGT GTGGGGCTGG GAGAGCAACC GCATTGCCCG CGAACTGGTG
GAAGCGTCCC ATGGCCGTAT CGTGGCGGAA AAGTACTTCC ACTTCGGCGA TTGCGACTTC
GAGGCCATCG TTCCCCGGAT TCTGGAAGGC GCTGCTGACT TCGTGCTCAA CAACCTGGTC
GGCGAGTCCT CCTATGCCTT CCTGGCCCAA CTCGAGGCCG CCTGCGAACG CCAAGGCACC
GGCATCACCG TGCTCAGCTG CAATTTCACC GAGTGCGAGC TGCCGGCGAT TCCTCGTTTA
CGGCATGTAC GCCTGTTGTC TTGCGGTCCT TGGTTCGATC ATCCCGGCAA CGGCTTCAGT
GCGCGCCAAC GCGTCCGACA TGGCGCGCAG ATCTATTCGA GTTGTTACAC CAACGCCTAC
AACGCCGTTC AGTTGCTGGC GCGGGGCTGC GATGCGGTAG GTAGCGACGA CCCCTCGAAG
GTACTGGCGT GGCTGCATGC GACCTCGCAT TCCACCTTGA TGGGCGAGTT GGCGTTCAAC
CCTCGCAATA ATCATCTGGC ACTGCCGTGC TGCATCGCCG AGGCGGGAGA CGAAGGCTTT
CGCATCGTGC ATCGCGAAAG CGGCGTGCGG GACGCCGACC CCTACCTGAC CCGCACCGGT
ATCCCCCAGT TCCGCGACGT GGTCGGTGCC GCGCCCACGC CGCCCCACTT GAGGGTCGTG
AAATGA
 
Protein sequence
MTSATKPERP MRRSGFFCGL AMKPEIAVGL LYSTTGTYQR ISNNARSGAL QAVADINADA 
TSGVTLVAHE YDPHGELEAY HRGVEDLLAR GVRHVVGTTT SASRKDIVPD VERDEALLWY
ACPYEGFECS ENVLYSGGCP SQNLVPLLAY ALRERGKRGV LIGSNYVWGW ESNRIARELV
EASHGRIVAE KYFHFGDCDF EAIVPRILEG AADFVLNNLV GESSYAFLAQ LEAACERQGT
GITVLSCNFT ECELPAIPRL RHVRLLSCGP WFDHPGNGFS ARQRVRHGAQ IYSSCYTNAY
NAVQLLARGC DAVGSDDPSK VLAWLHATSH STLMGELAFN PRNNHLALPC CIAEAGDEGF
RIVHRESGVR DADPYLTRTG IPQFRDVVGA APTPPHLRVV K