Gene Csal_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0197 
Symbol 
ID4026763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp218114 
End bp218686 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content66% 
IMG OID637965348 
ProductXRE family transcriptional regulator 
Protein accessionYP_572260 
Protein GI92112332 
COG category[K] Transcription 
COG ID[COG3620] Predicted transcriptional regulator with C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0555347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAATA TAGTGCACAA GTCTAGCGAG CGTCCCGATG TCCTGGTGCA CGTTGCCGCC 
AACGTGAGGC GCCTGCGCCA GGGGGCGTCG CTGAGCCAGC AGGCGCTGGC CGAGCGGGCC
GGCGTGAGTC GGCGCATGCT GGTCAATATC GAAAAGGGCG ACGTCAACGT CAGCCTGAGC
ACGCTGGATC GACTCGCCGA GGCGCTGGGG GTACTGTTCT ACGCCCTGGT TCAGCCGCCG
GGCAGCGAGG ACTCGGCGCG CATCGACGAA GTCGCCTGGG TGGGGCGCTT CCCCGACAGT
CACGCCCGGC TGCTGGCGAG CAAGCCGGCT CGACAGGAGG TCGAGTTGTG GTCCTGGTCG
ATGGAGCCTG GAGAGAGTTA CGAGTCCGTC GCCGACGGCA CCGGCTGGCA CGAGATGCTG
GTGGTGATCG AGGGCACGCT GACCCTGGAG CTCGCGGACC ACGAGGTGAC GATCGAGGCC
GGTGACTTTC ACGTCTACCC CAGCGACCAG TTCCACCGTT ACCGCAACGA GGGTACGGGG
CGTCTGCGCT TCATCCGCAA CGTGGTGCAC TGA
 
Protein sequence
MGNIVHKSSE RPDVLVHVAA NVRRLRQGAS LSQQALAERA GVSRRMLVNI EKGDVNVSLS 
TLDRLAEALG VLFYALVQPP GSEDSARIDE VAWVGRFPDS HARLLASKPA RQEVELWSWS
MEPGESYESV ADGTGWHEML VVIEGTLTLE LADHEVTIEA GDFHVYPSDQ FHRYRNEGTG
RLRFIRNVVH