| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0177 |
|---|
| Symbol | |
|---|
| ID | 4026246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 201178 |
|---|
| End bp | 201750 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637965328 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_572240 |
|---|
| Protein GI | 92112312 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAG GCATTACGCC ACCATTAATC GCCGGCAACC TCGCGCTCGA TTTCATCAAC
ACGCAGTTTG GCGTCGGAGC CGACCGGTAC GAGTGTCTGA ATGACGATTC CAGTGTCGTT
GAGTGGCTCC ATCAGGCCGG TGTGCTGAAT GACACACTCG CGGCTCCGCC CGCCGGGCTG
GTGGAACGGG CTCGGGAATT GCGCGAAGAC ATGCAAACAC TGATCGTCTC GGCCAGGGAG
GGGCGAGGCG CCGATCCCGC CATCGTCAAT CAGGTGCTGG AGCGCGGCCA TCCCATCGAG
AGGCTCGAGT GGGTGCCAGC GTACGCCGCC TTCCAGAAAC AGACGTACCG ACGCGATCTG
ACGAGCGAGA GCTTGTTGCA GCCGGTCGCG CAGGCATTGG TCGAGCTGCT GACGAAAGAG
GACTTGCACC TGGTGAAAGA GTGCCAGGCC CCCGACTGCG TCTTGCTATT TCACGATCAG
ACGAAGTCTC ATCGGCGCCG CTGGTGCAGC ATGGCCTCAT GCGGCAACCG AATGAAGGCG
GCCGCGCATC GAGCCAGAAA AAGCGCGACA TGA
|
|---|
| Protein sequence | MSSGITPPLI AGNLALDFIN TQFGVGADRY ECLNDDSSVV EWLHQAGVLN DTLAAPPAGL
VERARELRED MQTLIVSARE GRGADPAIVN QVLERGHPIE RLEWVPAYAA FQKQTYRRDL
TSESLLQPVA QALVELLTKE DLHLVKECQA PDCVLLFHDQ TKSHRRRWCS MASCGNRMKA
AAHRARKSAT
|
|---|
| |