Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0140 |
Symbol | |
ID | 4027281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 161198 |
End bp | 161992 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965291 |
Product | short chain dehydrogenase |
Protein accession | YP_572203 |
Protein GI | 92112275 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTC AGATCGAACG ACGTGTGGCC GTGGTCACCG GTGGCTCCTC GGGAATCGGA CTCGAAACCG TGCGCCTGCT GCTCGAATCG GGCGCCAGCG TGGCGTTTTG CGGCCGTGAT GCGAGCCGTC TGGAAGCCGC GCGCGACAGG CTCGCCGAGG CCCATCCCGA GGGCGAGATA TTCACCGCCC CCTGCGACGT GCTCGATGCC GAGGCATGCA GGGAGTTCGC TGCTCAAGTC GAGGCGCGGT TCGGCGGTAT CGACATGCTG ATCGCCAATG CCGGACAAGG CTACGTGGCA CATCTCGACG AAACACCGGA TACCGCCTGG CTGGACGAGA CCAACCTCAA GCTGCGCGGT GTGCTCAACC CCCTGGCCGC ATTTCGCGGT GCCCTGCGCG ACTCCGACAT CGGCTCGCTG ACCTGCGTCA ATTCCTTGCT GGCATTGCAG CCGGAGCCGC ACATGATCGC GACCTCGGCG GCCCGTGCGG CCTTGCTCAA TCTCACTCAC TCCCTGGCGC ACGAGTTGAT CGCGGAGGGC ATCCGGGTCA ATTCGATCTT GCTGGGCATG GTCGAGTCGG GACAGTGGCG GCGCCGTTTC GAGCAGCGCG AGGACCGCTC GCAGTCCTGG CAGGAGTGGG TCGCGGGCAT CGCCACCAAA CGCGGCATTC CCATGAAGCG CCTCGGCCGT CCCGAGGAAC CCGCCCGTGC CCTGGTCTTT CTGGCCTCGC CACTGGCTTC CTTCACCACC GGCGCGGCGC TCGATGTCTC CGGTGGTTTC AATCGCCACC TCTGA
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Protein sequence | MSFQIERRVA VVTGGSSGIG LETVRLLLES GASVAFCGRD ASRLEAARDR LAEAHPEGEI FTAPCDVLDA EACREFAAQV EARFGGIDML IANAGQGYVA HLDETPDTAW LDETNLKLRG VLNPLAAFRG ALRDSDIGSL TCVNSLLALQ PEPHMIATSA ARAALLNLTH SLAHELIAEG IRVNSILLGM VESGQWRRRF EQREDRSQSW QEWVAGIATK RGIPMKRLGR PEEPARALVF LASPLASFTT GAALDVSGGF NRHL
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