Gene Csal_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0140 
Symbol 
ID4027281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp161198 
End bp161992 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID637965291 
Productshort chain dehydrogenase 
Protein accessionYP_572203 
Protein GI92112275 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTC AGATCGAACG ACGTGTGGCC GTGGTCACCG GTGGCTCCTC GGGAATCGGA 
CTCGAAACCG TGCGCCTGCT GCTCGAATCG GGCGCCAGCG TGGCGTTTTG CGGCCGTGAT
GCGAGCCGTC TGGAAGCCGC GCGCGACAGG CTCGCCGAGG CCCATCCCGA GGGCGAGATA
TTCACCGCCC CCTGCGACGT GCTCGATGCC GAGGCATGCA GGGAGTTCGC TGCTCAAGTC
GAGGCGCGGT TCGGCGGTAT CGACATGCTG ATCGCCAATG CCGGACAAGG CTACGTGGCA
CATCTCGACG AAACACCGGA TACCGCCTGG CTGGACGAGA CCAACCTCAA GCTGCGCGGT
GTGCTCAACC CCCTGGCCGC ATTTCGCGGT GCCCTGCGCG ACTCCGACAT CGGCTCGCTG
ACCTGCGTCA ATTCCTTGCT GGCATTGCAG CCGGAGCCGC ACATGATCGC GACCTCGGCG
GCCCGTGCGG CCTTGCTCAA TCTCACTCAC TCCCTGGCGC ACGAGTTGAT CGCGGAGGGC
ATCCGGGTCA ATTCGATCTT GCTGGGCATG GTCGAGTCGG GACAGTGGCG GCGCCGTTTC
GAGCAGCGCG AGGACCGCTC GCAGTCCTGG CAGGAGTGGG TCGCGGGCAT CGCCACCAAA
CGCGGCATTC CCATGAAGCG CCTCGGCCGT CCCGAGGAAC CCGCCCGTGC CCTGGTCTTT
CTGGCCTCGC CACTGGCTTC CTTCACCACC GGCGCGGCGC TCGATGTCTC CGGTGGTTTC
AATCGCCACC TCTGA
 
Protein sequence
MSFQIERRVA VVTGGSSGIG LETVRLLLES GASVAFCGRD ASRLEAARDR LAEAHPEGEI 
FTAPCDVLDA EACREFAAQV EARFGGIDML IANAGQGYVA HLDETPDTAW LDETNLKLRG
VLNPLAAFRG ALRDSDIGSL TCVNSLLALQ PEPHMIATSA ARAALLNLTH SLAHELIAEG
IRVNSILLGM VESGQWRRRF EQREDRSQSW QEWVAGIATK RGIPMKRLGR PEEPARALVF
LASPLASFTT GAALDVSGGF NRHL