| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0113 |
|---|
| Symbol | |
|---|
| ID | 4027039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 135593 |
|---|
| End bp | 137452 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637965264 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_572176 |
|---|
| Protein GI | 92112248 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCT GGTTCGAAAA CCGTCTCGCC CCCTTTCCGC CCGAAGAGCC ACAACGGCCG
CCGGACACGC TGATCGCCTT CTGCCTGCAT TACACGCGCG GCGCCTGGCC CTACCTGCTG
ACGGCAACGG TGCTGATGGC GCTCATCGCC GGCATCGAAG TGTGGATGTT CGGGTTTCTC
GGCAATATCG TCGATTGGCT GGCCGCCCAG GACCGCGAGA CGTTTCTCGC CGACCAGGGC
TGGAAGCTGA CCGGCATGGC GCTGATCGTG CTGGTCCTGC TGCCCGGCAT GGTGTGGCTG
CATTCGCTGT TCCAGCAGCA GACCCTGATG GGCAATTTTC CCATGCGCAT CCGCTGGCAG
GCGCATCGTT ACCTGCTGCG ACAATCGATG GGCTTCTATC AGGACGAATT CGCCGGACGC
ATCGCCACCA AGGTGATGCA GACGGCGCTG GCCGTACGCG AGTGCGTGAT CAAGCTGTTC
GACGTGCTCA ACTACGTCAG CGTCTATTTT CTCGGCACGC TGCTGCTGGT GGGCAACGCC
GACTGGCGGC TGGCACTTCC CCTGGTCGCG TGGCTGGCCG GTTACCTCGT GCTGCTGCGG
GTGTTCGTGC CGCTCATGGG GCGTGTGTCC AAATCCCAGG CCGACGCTCG ATCGCGCATG
ACGGGTCGCA TCGTCGACAG TTACAGCAAC ATCCAGACGG TCAAGCTGTT CTCTCATGCC
CAGCGGGAAG CCGCCTTCGC CAAGGAAGGC ATGCATGGCT TCCTGCTCAC CGTGCATCGT
CAGATGCGGC TGGTCACCGG CCTCTACGGC CTGCTCTACC TGCTCAACGC ACTGCTGCTG
TTCAGCATCG GCTGGCTGTC GATCCATCTA TGGCTGATCG AGGCGGTCAG CGTGGGGGCG
GTCGCCGTGG CCCTGGGGCT GGTGATGCGG CTGTGGGGCA TGTCGCAGTG GATCATGTGG
GAAGTCTCCG CGCTGTTCGA GAACATCGGC ACCGTGCAGG ATGGCATGGC GACGCTCTCC
CTGCCTCGCC AGATCGAGGA CTCACCCGAG GCGAAACCGC TCGCCATCGA TCGCGGCGAG
ATCGTGTTCG ACCATATTCG CTTTCACTAC GGCAAGGGCA GCGGCGTCAT CGACGACCTT
TCGCTCCATA TTCGCCCCGG CGAGAAGATC GGGCTGATCG GCCCTTCCGG CGCCGGCAAG
TCGACCCTGG TCAACCTGCT GCTGCGCTTT TTCGAGTTGG AAGGGGGCGC GATTCGCATC
GACGGGCAGG ACATCGCCGA CGTGACGCAG GAAAGCCTGC GCGCGAAAAT CGGCATGGTG
ACGCAGGACA CCTCATTGCT GCATCGCTCG GTGCGCGACA ACCTCCTCTA CGGCCGGCCC
GACGCCACCG ACGACATGGC GTGGCAGGCG GCGAAACAGG CCCATGTGGC GGAATTCATC
GAGTCGCTGC GCGACATCCA CGGACGGCGG GGCTTCGAGG CCCATGTCGG CGAACGCGGC
GTCAAGCTCT CCGGCGGCCA GCGCCAACGC CTGGCCATCG CCCGCGTCAT GCTCAAGGAC
GCGCCGATTT TGATTCTCGA CGAGGCCACC TCGGCGCTGG ATTCCGACGT CGAGGCCGCG
ATTCAGGAGA ACCTCGATCA GCTGATGCGG GGCAAGACGG TCATCGCCAT CGCCCACCGC
CTCTCCACCA TCGCGGCCAT GGACCGGCTG GTGGTCATGG AGCAAGGACG CATCGTCGAG
CAGGGCAGCC ATGCAGAACT GATCCGCCAG AACGGTCTCT ATGCACGGCT ATGGCGACGC
CAGTCGGGCG GTTTCCTGGA GGCCGCCACC ACGCCCTCCT CGGCGCACGA AGCAAACTGA
|
|---|
| Protein sequence | MFRWFENRLA PFPPEEPQRP PDTLIAFCLH YTRGAWPYLL TATVLMALIA GIEVWMFGFL
GNIVDWLAAQ DRETFLADQG WKLTGMALIV LVLLPGMVWL HSLFQQQTLM GNFPMRIRWQ
AHRYLLRQSM GFYQDEFAGR IATKVMQTAL AVRECVIKLF DVLNYVSVYF LGTLLLVGNA
DWRLALPLVA WLAGYLVLLR VFVPLMGRVS KSQADARSRM TGRIVDSYSN IQTVKLFSHA
QREAAFAKEG MHGFLLTVHR QMRLVTGLYG LLYLLNALLL FSIGWLSIHL WLIEAVSVGA
VAVALGLVMR LWGMSQWIMW EVSALFENIG TVQDGMATLS LPRQIEDSPE AKPLAIDRGE
IVFDHIRFHY GKGSGVIDDL SLHIRPGEKI GLIGPSGAGK STLVNLLLRF FELEGGAIRI
DGQDIADVTQ ESLRAKIGMV TQDTSLLHRS VRDNLLYGRP DATDDMAWQA AKQAHVAEFI
ESLRDIHGRR GFEAHVGERG VKLSGGQRQR LAIARVMLKD APILILDEAT SALDSDVEAA
IQENLDQLMR GKTVIAIAHR LSTIAAMDRL VVMEQGRIVE QGSHAELIRQ NGLYARLWRR
QSGGFLEAAT TPSSAHEAN
|
|---|
| |