Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0102 |
Symbol | |
ID | 4027028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | + |
Start bp | 126737 |
End bp | 127408 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965253 |
Product | two component heavy metal response transcriptional regulator |
Protein accession | YP_572165 |
Protein GI | 92112237 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.753235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATCC TGCTGGTGGA AGACGAAAGC AAGACCGCCG ACTACCTTGC CAGGGGGCTG GGCGAGGCCG GATACCGGGT CGAGGTGGCC CGGGACGGGC TGGACGGCCG GCACCTGATC GAGGAGGCCG ACTTCGAGCT GATCATCCTC GACGTCATGT TGCCGGGGCT CGACGGCTGG GAACTGCTGC GGCTGATCCG TCGCCATGGC CAGGTGCCGG TGTTGTTCCT GACCGCCCGG GATGCCGTGG AATACCGGGT CAAGGGATTG GAGCTGGGCG CTGACGACTA TCTGGTCAAA CCCTTTTCTT TCGTCGAGCT GCTGGCCCGG GTGAGGACGC TGCTGCGCCG TGGTCCGCTG CGGGAGCGGG AGCGCTTCCA GGTGGCCGAT CTGCACATGG ACGTGCTGAA ACGCCGGGTC ACGCGGGGCG AGACGCGGCT TGCGCTGACC AACAAGGAGT TCGCGCTGCT GCAGCTGCTG CTCGAGCGCG AGGGCGAGGT ATTGTCACGG ACCTTGATCG CCTCCGAGGT GTGGGGCATG AACTTCGACA GCGACACCAA TGTGGTGGAG GTGGCCGTGC GGCGGTTGCG GGCCAAGGTG GACGACCCCT TCACGCGTCG GCTGATTCAC ACCGAGCGGG GCATGGGCTA CGTGCTGGAG GACCGCGGTT GA
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Protein sequence | MRILLVEDES KTADYLARGL GEAGYRVEVA RDGLDGRHLI EEADFELIIL DVMLPGLDGW ELLRLIRRHG QVPVLFLTAR DAVEYRVKGL ELGADDYLVK PFSFVELLAR VRTLLRRGPL RERERFQVAD LHMDVLKRRV TRGETRLALT NKEFALLQLL LEREGEVLSR TLIASEVWGM NFDSDTNVVE VAVRRLRAKV DDPFTRRLIH TERGMGYVLE DRG
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