Gene Csal_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0102 
Symbol 
ID4027028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp126737 
End bp127408 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID637965253 
Producttwo component heavy metal response transcriptional regulator 
Protein accessionYP_572165 
Protein GI92112237 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.753235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCC TGCTGGTGGA AGACGAAAGC AAGACCGCCG ACTACCTTGC CAGGGGGCTG 
GGCGAGGCCG GATACCGGGT CGAGGTGGCC CGGGACGGGC TGGACGGCCG GCACCTGATC
GAGGAGGCCG ACTTCGAGCT GATCATCCTC GACGTCATGT TGCCGGGGCT CGACGGCTGG
GAACTGCTGC GGCTGATCCG TCGCCATGGC CAGGTGCCGG TGTTGTTCCT GACCGCCCGG
GATGCCGTGG AATACCGGGT CAAGGGATTG GAGCTGGGCG CTGACGACTA TCTGGTCAAA
CCCTTTTCTT TCGTCGAGCT GCTGGCCCGG GTGAGGACGC TGCTGCGCCG TGGTCCGCTG
CGGGAGCGGG AGCGCTTCCA GGTGGCCGAT CTGCACATGG ACGTGCTGAA ACGCCGGGTC
ACGCGGGGCG AGACGCGGCT TGCGCTGACC AACAAGGAGT TCGCGCTGCT GCAGCTGCTG
CTCGAGCGCG AGGGCGAGGT ATTGTCACGG ACCTTGATCG CCTCCGAGGT GTGGGGCATG
AACTTCGACA GCGACACCAA TGTGGTGGAG GTGGCCGTGC GGCGGTTGCG GGCCAAGGTG
GACGACCCCT TCACGCGTCG GCTGATTCAC ACCGAGCGGG GCATGGGCTA CGTGCTGGAG
GACCGCGGTT GA
 
Protein sequence
MRILLVEDES KTADYLARGL GEAGYRVEVA RDGLDGRHLI EEADFELIIL DVMLPGLDGW 
ELLRLIRRHG QVPVLFLTAR DAVEYRVKGL ELGADDYLVK PFSFVELLAR VRTLLRRGPL
RERERFQVAD LHMDVLKRRV TRGETRLALT NKEFALLQLL LEREGEVLSR TLIASEVWGM
NFDSDTNVVE VAVRRLRAKV DDPFTRRLIH TERGMGYVLE DRG