Gene Csal_0101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0101 
Symbol 
ID4027027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp126187 
End bp126594 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content67% 
IMG OID637965252 
Producttransthyretin 
Protein accessionYP_572164 
Protein GI92112236 
COG category[R] General function prediction only 
COG ID[COG2351] Transthyretin-like protein 
TIGRFAM ID[TIGR02962] hydroxyisourate hydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.757339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTAT CCCGCACGCT GATCGCCGCC ATCGGCCTCG GCGCCACCGC CCCAGCCCTG 
GCTGCCGACA ACCCGCTGAG CGTACACGTG CTCGACATCC AGTCCGGCCA GCCGTCGCCG
GGGATCGAGG TCCAGCTCGA GAAGCGCACC GAGAGCGGCT GGGAGTCCCT GGCGACCGGC
ATCACGGCCG AGTCGGGCCG CATCTCGGCG CTCTATCCCG ACGACCGGGA CTTCACGGCG
GGTGTCTACC GCGTGACCTT CGAGACCGGT GACTGGTTCG CCGAGCACGA TACCCGGACC
TTCTTCCCCG AGATTCCGGT GCCCTTCGAA GTGACCGACC CCTCGCAGCA CTACCATATT
CCGCTGCTGT TGAGCCCCTA CGGTTATTCC ACCTACCGCG GCAGCTGA
 
Protein sequence
MRLSRTLIAA IGLGATAPAL AADNPLSVHV LDIQSGQPSP GIEVQLEKRT ESGWESLATG 
ITAESGRISA LYPDDRDFTA GVYRVTFETG DWFAEHDTRT FFPEIPVPFE VTDPSQHYHI
PLLLSPYGYS TYRGS