| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0099 |
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| Symbol | |
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| ID | 4026021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 123344 |
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| End bp | 125305 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637965250 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_572162 |
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| Protein GI | 92112234 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGT TCGACGAGAT TCCTGCCGAA CGTCCGGCCA CGCCCTTGCT CGATACCTGC
GAGCATCCCG CGGCGTTACA CGATTTCAAC GCGACCCAGT TGCGCCAGCT GGCCGACGAG
TTGCGTGCCT ATTTGCTGTA CAGCGTCGGC TGTACCGGCG GACACTTCGG CGCCGGCCTG
GGTGTGGTCG AGTTGACCGT GGCCCTGCAT CACATCCTGG ATACGCCGTA TGACCGCCTG
GTGTGGGACG TCGGTCACCA GGCCTACCCC CACAAGATCC TGACCGGGCG TCGCGAGCAG
ATGTCGACCA TTCGGCAGTT CGGGGGTCTG GCGGCGTTTC CCAAGCGCGA CGAGTCGCCC
TATGACACCT TCGGTGTCGG TCATTCGAGC ACCTCGATCT CGGCGGCGCT GGGCATGGCG
CTGGCGGCGC GGACCAAGGG CGAACGGCGT CGTGTGTGTG CGGTCATCGG CGATGGCGCC
TTGAGCGCGG GCATGGCATT CGAGGCGCTG GCGCATGCCG GCCATGTCGA TGCCAACATG
CTGGTGATTC TCAACGACAA CGAGATGTCG ATCTCCGAGA ACGTCGGCGG CATGGCGAGC
TATCTGGCAC GCATTCTGGT CAGCAAGCCG TACACGGTGA TGCGCGAGAA CAGCAAGCGC
GTGCTCTCGC ACCTGCCGGG CGCGCTGGAG CTGGCCCGGC GCACCGAGGA GCACGTCAAG
GGCATGGTCA GCCCGGCGAC CCTGTTCGAG GAGATGGGAT TCAACTACAT CGGTCCCATC
GACGGTCATG ACCTGCCGAC GCTGGTGCAG ACGCTGGGCA ACATGGCGAA TCTGGAGGGG
CCGCAGTTCC TGCATATCAA GACCTGCAAG GGGCGCGGCT TTCGTCCCGC CGAGGCCGAT
CCCATCGGTT ACCACGCCAT CACCAAGCTC GAGAAGACCA CCAGCGAGCC GCCGCCCAAA
AAAGAGCCGC GCTCGCCCAA CGCGGCCACG GCGGAGCCGG AAGCCCAGCC CAAGCCCCAG
CCCAAGCCGC GCAAGTATTG CAATGTCTTC GGCGAGTGGA TCTGCGACAT GGCGGCGGTG
GACGCGCGTC TGATTGGCAT CACGCCGGCG ATGCGCGAGG GCTCCGACCT GATCCGCTTC
TCGCGCGAGT ATCCCGAGCG CTACTACGAC GTGGCGATCG CCGAACAGCA TGCGGTGACG
CTGGCGGCGG GCATGGCGTG CGAGGCGATG AAGCCCGTGG TGGCGATCTA CTCGACCTTC
CTGCAGCGCG GCTATGACCA GTTGATCCAC GACGTGGCGG TGCAGGCGCT CGATGTGACC
TTCGCCATCG ACCGTGCCGG CGTGGTGGGC GAGGACGGCC CGACTCACCA TGGTGCGCTG
GACCTTTCCT TCCTGCGCTG CATTCCCGGC ATGATCGTGC TGGCGCCCGC CGATGAGGCC
GAGTGTCGAG CCATGCTGAG CGCCGCGTAC CATCACCCCG GACCGGCGGC GGTACGTTAT
CCGCGTGGCA CCGGTCCCGG CACGCAGGTG GCATCGAACC TGGAGGCGCT GCCCATCGGC
GAGGCCGAGA CACGGCGCAG CGGTCGCGAA GGCGGCGTGG CGTTGCTGGC GTTCGGCAGC
ATGAACGGCC CTGCCGGCGA GGTGGCCGAG CGTCTCGATG CCACGCACCT CAACATGCGC
AGCGTGAAGC CGCTGGATCG TGAGGCGATC CTCGCGGCAG CGCGCGACCA CCGGCTGCTG
GTGACCCTCG AGGAGAGCGT CGTCGCCGGT GGCGCGGGAA GCGGCGTCAA TGAACTCCTG
GCCGCCGAGG GTGTCCAGGT CGAAGTATTG AACCTGGGGC TGCCGGACGA TTTCGTCGAG
CACGGCAAAC CCGCCGAGTT GCTGGCGGCG TGCGGGCTCG ATGCCGAGGG CATCGAAACC
GCCGTGCGTC GGCGCCTGGA AACGTCGCGT GCCGATGACT GA
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| Protein sequence | MKLFDEIPAE RPATPLLDTC EHPAALHDFN ATQLRQLADE LRAYLLYSVG CTGGHFGAGL
GVVELTVALH HILDTPYDRL VWDVGHQAYP HKILTGRREQ MSTIRQFGGL AAFPKRDESP
YDTFGVGHSS TSISAALGMA LAARTKGERR RVCAVIGDGA LSAGMAFEAL AHAGHVDANM
LVILNDNEMS ISENVGGMAS YLARILVSKP YTVMRENSKR VLSHLPGALE LARRTEEHVK
GMVSPATLFE EMGFNYIGPI DGHDLPTLVQ TLGNMANLEG PQFLHIKTCK GRGFRPAEAD
PIGYHAITKL EKTTSEPPPK KEPRSPNAAT AEPEAQPKPQ PKPRKYCNVF GEWICDMAAV
DARLIGITPA MREGSDLIRF SREYPERYYD VAIAEQHAVT LAAGMACEAM KPVVAIYSTF
LQRGYDQLIH DVAVQALDVT FAIDRAGVVG EDGPTHHGAL DLSFLRCIPG MIVLAPADEA
ECRAMLSAAY HHPGPAAVRY PRGTGPGTQV ASNLEALPIG EAETRRSGRE GGVALLAFGS
MNGPAGEVAE RLDATHLNMR SVKPLDREAI LAAARDHRLL VTLEESVVAG GAGSGVNELL
AAEGVQVEVL NLGLPDDFVE HGKPAELLAA CGLDAEGIET AVRRRLETSR ADD
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