Gene Csal_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0079 
Symbol 
ID4027258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp99140 
End bp99988 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID637965230 
Producthypothetical protein 
Protein accessionYP_572142 
Protein GI92112214 
COG category[R] General function prediction only 
COG ID[COG3257] Uncharacterized protein, possibly involved in glyoxylate utilization 
TIGRFAM ID[TIGR03214] putative allantoin catabolism protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAC GCAGCCACGA CGCACCTGAA AGAACCTACT ACGCCCCCCA TGGCGGTTTG 
CCGCCGCAGA GCCAGTTGAT TCATGGTCGC GCGGTCTTCA CCGAGGCCTA TGCGGTGATT
CCCAAGGGGG TGATGAGCGA TATCGTCACC AGTTTCCTGC CGCACTGGGA GAAGACCCGG
CTGTGGGTGC TGTCGCGGCC GCTTTCCGGC TTCGCGGAGA CGTTTTCGCA GTACATCATG
GAGGTCTCGC CCGGTGGCGG CAGCGAGCGG CCGGAGCCGG ACGAAGGCGC CGAGGGCGTG
CTGTTCGTGG TCGAGGGCGA GATGACGCTG ACCATCGCGG GGGAAGCGCA CGCGATGGGA
CCGGGAGGCT ATGCCTATCT GCCGCCGGGC TGCGACTGGC AGCTGCGCAA CGGCAGCGAC
GCGCCGGTGC GCTTCCACTG GATACGCAAG GCCTACGAGT TCGTCGAGGG GCTGGCAGTG
CCCGAAGCCT TCGTCACCAG CGACAACGAC ATCGCGCCGA TTGCCATGCC GGATACCGAC
GGCCGCTGGG CCACGACACG CTTCGTCGAT CCCCAGGACG TGCGCCACGA CATGCACGTC
AACATCGTTA CCTTCCAGCC CGGGGGCGTG ATCCCGTTCG ATGAAACCCA TGTCATGGAG
CATGGGCTCT ACGTGCTGGA GGGCCGTGCG ATCTACCACC TCAATCAGGA TTGGGTCGAG
GTCGAGGCCG GCGACTACAT GTGGCTGCGG GCCTTCTGTC CGCAATCCTG CTACGCCGCC
GGGCCGGGGC CGTTTCGCTA TCTGCTCTAC AAGGATGTGA ACCGGCACAT GAAGCTGCGC
TTGAGCTGA
 
Protein sequence
MSQRSHDAPE RTYYAPHGGL PPQSQLIHGR AVFTEAYAVI PKGVMSDIVT SFLPHWEKTR 
LWVLSRPLSG FAETFSQYIM EVSPGGGSER PEPDEGAEGV LFVVEGEMTL TIAGEAHAMG
PGGYAYLPPG CDWQLRNGSD APVRFHWIRK AYEFVEGLAV PEAFVTSDND IAPIAMPDTD
GRWATTRFVD PQDVRHDMHV NIVTFQPGGV IPFDETHVME HGLYVLEGRA IYHLNQDWVE
VEAGDYMWLR AFCPQSCYAA GPGPFRYLLY KDVNRHMKLR LS