Gene Csal_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0062 
Symbol 
ID4027241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp81378 
End bp82205 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID637965213 
ProductLuxR family transcriptional regulator 
Protein accessionYP_572125 
Protein GI92112197 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGCG AGCCGCAGCC GGCAACGTCC GCCCCCGGCC AGACCAGCCT GGAGAGCCTG 
GCCTGGCATC GTGCCTTCGG CGGGTTGGCC GCGTCGCTGG ATGCCCCCGA TTTCTGGCTG
GCGGCGGTCC GCACGATCGG CGCGCACCTT GCCTTCGATA CCTGGGTGGC GTTGATCTTC
CACCATCATC GGCCGCCCCG GATCCTCGCC GAAAGCGACG AGGACGATGG CGCCGACGAG
GCGCTCTTCC AGGACTACCA GCGTGGCCTG TACCTGCTCG ACCCGTTCTA CATCGACGCC
AAGGGGCGTG CCCGCGAGGG GCTCTACACC CTGGCCGACG TGGCGCCGCA GCGCTTCCGC
CACACCGAGT ACTATCAGCG CTATTTCCAG CGCAACATCG TCGCCGACGA GGTGCAGTTC
AACTGCCCGC TCGACGCCGA GCGGACGTTG TGCCTCTCGC TGGGTTCGAC CCGGGCCTTC
GATCATGCCG CGCTGGGGCT GTTGAGCCTC ATCCAGCCCT GGATGCTGGC GTTGATGCGC
CAGCGCATGC ATTTCGAGTT CGAGGGCGAG GACGGCACGC CGCCGGGGCC GCATCCCTGG
CATCCCCGTC CCGGCACGCC GCGCGAGCTG GATTCACGCT ACGCACTGAC CGAGCGGGAG
CGCGAGGTCA GCCAGCTCAT GCTGGGCGGC AGCTCGACCA AGGAGATCGC CCGACGGCTG
GCGATCTCGG TGGAAACCGT ACGCGCCCAC AAGAAACATC TCTACGCCAA GCTGGGCATC
AACTCGCAGT CGGAGCTGTT CTCGCTGTTC TGGCAGGCGC GCCCCTAG
 
Protein sequence
MTSEPQPATS APGQTSLESL AWHRAFGGLA ASLDAPDFWL AAVRTIGAHL AFDTWVALIF 
HHHRPPRILA ESDEDDGADE ALFQDYQRGL YLLDPFYIDA KGRAREGLYT LADVAPQRFR
HTEYYQRYFQ RNIVADEVQF NCPLDAERTL CLSLGSTRAF DHAALGLLSL IQPWMLALMR
QRMHFEFEGE DGTPPGPHPW HPRPGTPREL DSRYALTERE REVSQLMLGG SSTKEIARRL
AISVETVRAH KKHLYAKLGI NSQSELFSLF WQARP