Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Csal_0054 |
Symbol | |
ID | 4027233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chromohalobacter salexigens DSM 3043 |
Kingdom | Bacteria |
Replicon accession | NC_007963 |
Strand | - |
Start bp | 64112 |
End bp | 65674 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637965205 |
Product | outer membrane efflux protein |
Protein accession | YP_572117 |
Protein GI | 92112189 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.906913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGAC GCCGCCGCGC CCTGCGGGCC GCGGCGTCAG CTACCCCCAA TCGACAAGGC TGGCGACGCG ACATCGCCAG CCAAAGAATA TCGCAGGCAG AAGGAAAAAC GATCATCGAG GACTTATCCC AACACGCAGA AAGGTGGACG CTACGCAAGC TGGCAATCGT CGTCTGTCTG GCGCCGACCC TGGCGAAGGG CCAGGAAGCC GACTGGTGGA ACGCCGTCGA TCATGAGGCC AACGGCCGCG GGGCTTCCAA GGCCGCCCCG AGGATCAGCA CGACGCTGCC GGCCGAACCC TGGTCGCCAT CGACGACATC GACGAATAGG CCCGCCGGCA GCGGAAGTCG GACTCGATCC GCATCGCTCT CCGGGCCGCT GTCGCTCGAG GGTGCCGTGC GTCGGGGGCT GGCAATCAAC CCGGCGGTTC GTGCGGCGAT CGCCGATGCC GACGCCGCCG GTACCGAGGT GGATATCGCC GAATGGGGCT ACTTCCCCAC CGTCGACCTC TCGGCGGGCC CGGAAGAGTT CCCCTTCAGC GAGTTCGGCT ACGACGCCTC GGCCCGCCAG ATGCTCTACG ACTGGGGCCG CGTCGACAGC CAGGTTGCCA GCGCTAGTGC CTCGGCGCGA GAGGCTAGGC GGGCGCTCGG CGTGGCCGAA GAGGAGGCCG CCCTCGATAT CGCCGAGGCC TACCTGGACA TCCTGGCCGC CAGGCGTCGG CTGGAGTTGA CCCAGGATTA CGTCGATGAG CTCGAGGCGC TGCGCAGCCT GACCCAGGAC CGAGGCAGCA ACGGCTATAC CGATAGCAGT GAACAGGGGC GCGTGGCGCT GGATCTGGCC CAGGCCCGCG GCGAACTGGC CACGGAACGC GGTTCGCTGA ACGATGCCCG CCAGCAGTTC CGGGTGCTGG TCGGGGTCTC GCCGGACGCG CTGGATGCGC CCGATCCGGC GACCCTCACC GATCGCCTGG ATGACGCGAG ACTGGAACAG TGGATCGTGG CGGCGCCGGC CTATCGGCAG GCCGTGGCAA CCGCCGAACA GGCGCAGGCC GAACTGGACG AGACCCAGGC GTCGTTGAAG CCGCAGCTCA ACATCGAAGG CTCGCTGGAG CGACGCCAGA TCGGCGGCGA GCTGCAGAAC GACTCGGTGA TCGGGCTCCG CCTGCGCATG GATACGCTGC AGGGGCTGGC CAACTTCCAG CGTCCGGACG CCGCCCGGCA AAGGCTCGAG GCGGCCCGCT ATCGCGTCGA CGACCAGCGC CGCAAAATCC GCCGCAGCGT GCTGACCCTG ATCGAGAACG CCGAGGTCTA CCGCCAGCGC CAGCAGGCGC TGTCCGACCA AGTCGAGGAG GCCCAGTCCG TGGGAGATCT CTACGACGAC CAGTTCTCCG TGGGGCTGCG CGACGTCAAC GACCTGTTGA CGATTCGGCA GGAAGCGTTC TCGGCCCGTC GCCAGTTGAT CGACCTGGAG AGCCAGCAGA AGCGCATCCA GTATCGCGCC GCCTCGCAAC TGGGGCTGAT CAACCCGTTG ATCACAGGCC GCCTGGGAGG TGACGCTCCA TGA
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Protein sequence | MAGRRRALRA AASATPNRQG WRRDIASQRI SQAEGKTIIE DLSQHAERWT LRKLAIVVCL APTLAKGQEA DWWNAVDHEA NGRGASKAAP RISTTLPAEP WSPSTTSTNR PAGSGSRTRS ASLSGPLSLE GAVRRGLAIN PAVRAAIADA DAAGTEVDIA EWGYFPTVDL SAGPEEFPFS EFGYDASARQ MLYDWGRVDS QVASASASAR EARRALGVAE EEAALDIAEA YLDILAARRR LELTQDYVDE LEALRSLTQD RGSNGYTDSS EQGRVALDLA QARGELATER GSLNDARQQF RVLVGVSPDA LDAPDPATLT DRLDDARLEQ WIVAAPAYRQ AVATAEQAQA ELDETQASLK PQLNIEGSLE RRQIGGELQN DSVIGLRLRM DTLQGLANFQ RPDAARQRLE AARYRVDDQR RKIRRSVLTL IENAEVYRQR QQALSDQVEE AQSVGDLYDD QFSVGLRDVN DLLTIRQEAF SARRQLIDLE SQQKRIQYRA ASQLGLINPL ITGRLGGDAP
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