Gene Csal_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0050 
Symbol 
ID4027229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp58287 
End bp59192 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID637965202 
ProductPirin-like protein 
Protein accessionYP_572114 
Protein GI92112186 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGGGC ACCGGCTGAT TCAGCCTCTC CACGCCCGCA CGGCAGATGT CGGCGGCATC 
CCGGTCAACC GCGTGATGCC CCAAAGAGGC CGTCGGCTCA TCGGCGCCTG GTGCTTTCTC
GACCATGCCG GCCCGGCTAC CTTCACTGTC GGCGCAGGCG GCATGCGTGT TGGTTCACAC
CCGCACATCG GCCTACAGAC CTTTACCTGG ATGCTGGCCG GCGAAATCAT GCATCACGAC
AGCCTGGGCA ACGCCCAGCG CATCCGCCCC GGCGAACTCA ACCTGATGAC CGCGGGCCGT
GGCATCGCCC ATACCGAGGA ATCCATCCTC GAATCCGGCC AACTGCACGC CGCTCAGTTG
TGGATCACCC TACCCCACGC CACGCGCCAC ACATCGCCAC GCTTCGATCA CTACCCCGAC
TTGCCGCGCT GGAGCGAACA GGGCACGGAC GTGACGTTGC TGAGGGGCGA TTTTCAAGGC
CGCGAGGCGC CCACGCATGC TTTCTCGCCG CTGGTCGGGC TCGACATCGT CAGCCCCGAT
GCCACCCAGC TGACGCTCCC CGCCCGTACC GATTTCGAGT ATGGCGTCCT CTTGCTGGAA
GGCAGCCTCA CCATCGAGCG TGACCGTTTC GACACCAACG AGATGGCCTA TCTCGGCAGC
GGACTCGACG AGATCACGCT CGCAATGGAA GCCGGCACAC GCGCCCTGAT GCTCGGCGGC
GAACCGCTGA ACGAGGACAT ACTCATCTGG TGGAACTTCG TCGGTCACAG CAAGGCCGAG
ATCGCCGAGG CTCAGAAGGA ATGGGAAGAA TGGGAAGCCG GCAGCGACCG CTTCGGCGAC
GTGCCCGAAT TCGATGGGGA ACGGATCATG CCGCCACCGA TTCCGTGGAA GGTGACAGCC
AATTGA
 
Protein sequence
MDGHRLIQPL HARTADVGGI PVNRVMPQRG RRLIGAWCFL DHAGPATFTV GAGGMRVGSH 
PHIGLQTFTW MLAGEIMHHD SLGNAQRIRP GELNLMTAGR GIAHTEESIL ESGQLHAAQL
WITLPHATRH TSPRFDHYPD LPRWSEQGTD VTLLRGDFQG REAPTHAFSP LVGLDIVSPD
ATQLTLPART DFEYGVLLLE GSLTIERDRF DTNEMAYLGS GLDEITLAME AGTRALMLGG
EPLNEDILIW WNFVGHSKAE IAEAQKEWEE WEAGSDRFGD VPEFDGERIM PPPIPWKVTA
N