Gene Csal_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0048 
Symbol 
ID4027227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp57048 
End bp57542 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content61% 
IMG OID637965200 
Productprotein translocase subunit secB 
Protein accessionYP_572112 
Protein GI92112184 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAG ACAACAATCA GGCCGCTCAG GGTGGCAACG ACGCGCAGAA CCAGTTGCAG 
TTCTCGATGC AGCGCATCTA CGTCAAGGAC ATCTCCTTCG AGTCGCCCAA CGCGCCGAGC
GTGTTCCAGA ACGCGTTCAA GCCCAAGGTC GGGCTCGACC TCAACACCAC CCACAAGCAG
GTGGGTGAAA ACCTCTACGA GGTGGTGGTC AAGGTGACGG CTCAGGTCAC CAACAACGAA
GACGGCGCCA CGGCATTCCT CGCCGAAGTG GAACAGGCCG GTCTGTTCCG CATCGCCGGC
TTGAGCGACG ACCAGCTCGA CCACACCTTG GGCGCGTTCT GCCCCAACAT GCTGTTCCCC
TATGCGCGCG AGTGCATCGA CAACCTGGTC AATCGTGGCA GCTTCCCGCC ACTGATGCTG
TCGCCGGTCA ATTTCGAGGG CATGTACGCG CAGAAGAAGA AGCGCGAGAG CGAAGCCGCC
GAGAACGCGC ACTAA
 
Protein sequence
MAEDNNQAAQ GGNDAQNQLQ FSMQRIYVKD ISFESPNAPS VFQNAFKPKV GLDLNTTHKQ 
VGENLYEVVV KVTAQVTNNE DGATAFLAEV EQAGLFRIAG LSDDQLDHTL GAFCPNMLFP
YARECIDNLV NRGSFPPLML SPVNFEGMYA QKKKRESEAA ENAH