Gene Csal_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0043 
Symbol 
ID4027222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp50956 
End bp51756 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID637965195 
ProductAraC family transcriptional regulator 
Protein accessionYP_572107 
Protein GI92112179 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGT TCTGGCGAGA CCCGACGCTG CCTTTTGTCG AGAGCCGGCG GGCCACCGAT 
AGCCGCGCCT GCTACCGGCC CCACAGCCAC CCCACCCTGT CGATCGGTGT GGTCGACCGA
GGCCAGAGCC AGTTCCAGTG CCAACGCCGC CGCGAGTGGC TGACACCGGG CTGCCTGGTC
AGCGTGCCGG CGGGCGTGGT ACATGACTGC AACCCGCTGC CGGATCAGCC TTGGAGCTAC
CAGATGCTGT ATCTGGAACC GGCCTGGGTG AGCGAGGTGC TGGATGAGGC CTCAGCCGAG
ACCGACGCTG CCCCGACCCT GCCCTCGACG GTATTCATCG CCCGCGACGT CGCGCCTTAC
CAGGCCTTCT GTCGGCTCAA TGCGCTGCTT TTTTCCTCGG CTCCGAGGGC CGACAAGGAG
GCCGGACTGA TCGAGTTCCT CGGCAGTCGC CTGTGGTGTC ACGGGGACGC CATGGCCGTT
CATTGGCCGA ACTCATCCGA CCTGGATGAC CTCCAACGGC ATCTACTCGA GTGCCTCGAG
CGTCCGCCGT CACTCGAGGT GCTGGCTCGG GACCATGGCC TGAGCCGTTA CCAGGTGATT
CGACTGTTCC GCCGCGAGAC CGGGCTAACG CCCCATGCCT GGCTGCTCGA CCGGCGCATC
CAGCAGGCGC GCCGCCGCTT GTGTCAGGGA GTGGAGCTGG CGGAACTCGC GCAGGAACTC
GGCTTCGCCG ACCAAGGCCA CTTTCAGCGC GCCTTCAAGG CTCGGGTGGC GGCCACGCCG
GGTCGCTATC GCAGTACCTG A
 
Protein sequence
MTQFWRDPTL PFVESRRATD SRACYRPHSH PTLSIGVVDR GQSQFQCQRR REWLTPGCLV 
SVPAGVVHDC NPLPDQPWSY QMLYLEPAWV SEVLDEASAE TDAAPTLPST VFIARDVAPY
QAFCRLNALL FSSAPRADKE AGLIEFLGSR LWCHGDAMAV HWPNSSDLDD LQRHLLECLE
RPPSLEVLAR DHGLSRYQVI RLFRRETGLT PHAWLLDRRI QQARRRLCQG VELAELAQEL
GFADQGHFQR AFKARVAATP GRYRST