Gene Csal_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0039 
Symbol 
ID4026382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp46996 
End bp47868 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content66% 
IMG OID637965191 
Producthypothetical protein 
Protein accessionYP_572103 
Protein GI92112175 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTG CAACGGCACT CGTGGTTCTC GCCTCATTTT GCTGGGGTTT ATCGGGCGGC 
ATCGGCGGCA TGCTCATGGC GGACGACTGG GACGCGTTCG TCGTCTCGTT CTACCGGGGC
GCCATCGGCC TGGTGTTCGT GCTCGGCTGG CTGGCGATCC GCCCCCGCCA CAGCGGGTTG
AGCAACCCCC GTCTCTGGGG CTGGTCGGCA GTGGCCGGCC TGGGGGTCGC GGGCAACTTC
GCGTTCTACT TCCTCAGCAT CTCGCAGGGC AGCGTCGCGG TGGCGGCGAC CCTGATGTAC
TCGGCGCCGA TTTTCGTCTA TCTGCTCTCG TTCGTGCTCA AGCTCGAAAA ACCCACGCCG
CTGAAGTGGA CCGCCATCGC GGTGGTGATG CTCGGCATCG TGCTGCTGAC GCGCATCTAT
GACGTCGGCG CGGGCGGGAT CACTCTGCTC GGTGTAGGCG CCGGGCTGCT GGCCGGGGTC
TCATACGCGG TGTTCATCTT CGGGTTCAAG TACGCGGCAC CGCACGGCAG CCCACAGGCC
ATTCTGGTGA TCGCCTTCGC GGTGCTCGCC GTGCTCCTGG CCGGCCTCGG CGACACCAGC
CAAACCCTGG ACGTACTGCA CACGCCGGAT TGGCCGCTGT TCATCACGCT GGGGATACTC
GGCGCCGGGC TATCGTTCAT CTTCTACGTC AATGGCCTGC ACCACACCGC CCCGGCCGTG
GCCTCCATCG TCGCCATGGT GGAACCCGTC ACCGCCTCGC TCTTCGGTGT CGTGGTCCTC
GGCGAAAGCC TGGTGAGCAT TCAGATCGTC GGGATGGTGC TGATCCTCGC CACGGTGACC
GCGCTGAGCG TCTACTCCAG TCCCAAGGAA TGA
 
Protein sequence
MAGATALVVL ASFCWGLSGG IGGMLMADDW DAFVVSFYRG AIGLVFVLGW LAIRPRHSGL 
SNPRLWGWSA VAGLGVAGNF AFYFLSISQG SVAVAATLMY SAPIFVYLLS FVLKLEKPTP
LKWTAIAVVM LGIVLLTRIY DVGAGGITLL GVGAGLLAGV SYAVFIFGFK YAAPHGSPQA
ILVIAFAVLA VLLAGLGDTS QTLDVLHTPD WPLFITLGIL GAGLSFIFYV NGLHHTAPAV
ASIVAMVEPV TASLFGVVVL GESLVSIQIV GMVLILATVT ALSVYSSPKE