| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_0020 |
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| Symbol | |
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| ID | 4027339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chromohalobacter salexigens DSM 3043 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007963 |
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| Strand | + |
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| Start bp | 24625 |
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| End bp | 26139 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637965172 |
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| Product | L-threonine ammonia-lyase |
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| Protein accession | YP_572084 |
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| Protein GI | 92112156 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.381683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAG AGACCGTCAA GAAAATCCTC CAGGCTCGCG TTTACGAAGC GGCCCGGGAA
ACGCCGATAT CCCCTGCTCC CTTTCTCTCC CGCCGTCTCA ACAACACGAT TCTGATCAAG
CGCGAGGATT TGCAGCCGGT CTATTCCTTC AAGATTCGCG GCGCCTACAA CAAGATGGCC
CAGCTGAGCG ATGAACAGAA GGCCAAGGGC GTGATCGCCG CGTCCGCCGG CAACCATGCC
CAGGGCCTGG CCATGGCCGC CAAGCAGATG GGCGTCAAGG CGGTCATCGT GATGCCGCGC
ATCACGCCCG ACATCAAGGT CCAGGCCGTG CGCGCGCGTG GCGCCAAGGT CGTGCTCAAG
GGCGATGCCT TCGGCGAGGC GCTGGCACAT GCGCGCGAGC TGATCGACGA GCATGGCTAC
ACCTACATTC CGCCCTTCGA CGATAACGAC GTGATCGCCG GCCAGGGCAC GGTGGGCATG
GAGATCCTGC GTCAGCACAG CGGACCGCTG GACGCGGTAT TCGTGCCCGT GGGCGGTGGC
GGCCTGCTCG CCGGCGTGGT GGCGTACATC AAGTACCTGC GCCCCGAGAT CAAGGTGTAC
GGGGTCGAGG CGGAAGACGC TGCCTGCCTC AAGGCGGCCC TGGAAGCCGG CGAACGGGTC
ACCCTCGACC AGGTCGGCGT GTTCGCCGAG GGCGTCGCCG TGGCGCAGAT CGGCGAAGCG
CCGTTCGAGA TCCTGCGCCA CTGGGTGGAT GGCGTGATCA CCGTCACCAC CGATGAGATG
TGCGCGGCGG TCAAGGACAT CTTCGAGGAT ACGCGGGCGG TCGCCGAGAC CTCCGGCGCG
CTGTCGCTGG CGGGGCTCAA GAAATACATC CAGCAGCAGA ACGCCGAGGG CGAGACCCTG
CTGTGCATCA ACTCGGGCGC CAACACCAAT TTCGATCGTC TGCAGCACAT CGCCGAGCGC
ACGGAGCTGG GCGAGCAGCG CGAGGCGATT CTGGCGGTGA CGATTCCCGA ACGGCCGGGC
AGTTTCAAGA AATTCTGCAA GACCATCGGC AAGCGCATGG TCACCGAGTT CAATTACCGC
TATGCCGACC CCGACCACGC GCACATCTTC GTCGGCGTGC AGGTCAAGCC GGGCGGCGAG
GACCGCCAGG CGGTGATCGA CAAGTTGCGC GAGGCCGGTT ATCCGGTGGA GGACCTCACC
GACAACGAAC TGGCCAAGCT GCATATTCGC CATCTCGGTG GCGGGCGTCC CAAGGAGCAC
TTCAGCGAAG AAGTCTACCG GTTCGAGTTC CCCGAACGCC CCGGGGCGCT GATGAACTTC
CTGACTCATC TGCCCGGCGA CTGGAACATT TCACTGTTCC ACTACCGCAA CCATGGCGCG
GCGTATGGCC GAGTGCTGGT GGGCATGCAG ATCCCCAATG GCGCCCGGGC GCATGTCGAG
GAACATTTCG AACGCATCGG CTATCGCTAC TGGAAGGAAT CCGACAATCC CGCCTATCGT
CTGTTCATGG CCTGA
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| Protein sequence | MLEETVKKIL QARVYEAARE TPISPAPFLS RRLNNTILIK REDLQPVYSF KIRGAYNKMA
QLSDEQKAKG VIAASAGNHA QGLAMAAKQM GVKAVIVMPR ITPDIKVQAV RARGAKVVLK
GDAFGEALAH ARELIDEHGY TYIPPFDDND VIAGQGTVGM EILRQHSGPL DAVFVPVGGG
GLLAGVVAYI KYLRPEIKVY GVEAEDAACL KAALEAGERV TLDQVGVFAE GVAVAQIGEA
PFEILRHWVD GVITVTTDEM CAAVKDIFED TRAVAETSGA LSLAGLKKYI QQQNAEGETL
LCINSGANTN FDRLQHIAER TELGEQREAI LAVTIPERPG SFKKFCKTIG KRMVTEFNYR
YADPDHAHIF VGVQVKPGGE DRQAVIDKLR EAGYPVEDLT DNELAKLHIR HLGGGRPKEH
FSEEVYRFEF PERPGALMNF LTHLPGDWNI SLFHYRNHGA AYGRVLVGMQ IPNGARAHVE
EHFERIGYRY WKESDNPAYR LFMA
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