Gene Csal_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_0008 
Symbol 
ID4027327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp10507 
End bp11508 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content61% 
IMG OID637965160 
ProductADP-glyceromanno-heptose 6-epimerase precursor 
Protein accessionYP_572072 
Protein GI92112144 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGCTT CCCGCGTGGG TGCACGACTT GAAGGAATCG ACGACATGAT CGTAGTGACG 
GGCGGTGCCG GGTTCATCGG CGCCAATCTA GTGAAGGCTT TGAACGCACG CGGCCGCGAG
GATGTCCTCG TGGTCGACGA CCTTTCCGAC GGCACCAAGT TCGTCAATCT CGCCGACTGC
ACGCTGGGGG ATTATCTCGA CAAGGATGAT TTCCTGGCGC GCGTGAAGGC CGAACTGCGC
GGCGAACCCA GCGAGCTGCC GCCGATCGAG GCGATTTTCC ACGAAGGCGC CTGTTCGGAT
ACCACCGAGT GGGACGGCAA GTTCATGCTC GAGAACAACT TCGAGTATTC CAAGGTGCTG
CTGCATTTCT GCCAGTACAA GCGTATCCCC TTCCTGTATG CCTCGTCGGC GGCCACCTAT
GGCGGCAGCG AGGTGTTCGT GGAAGCGCCG GAGCACGAGA AGCCGCTCAA CGTCTACGGC
TACTCCAAGC TGCTGTTCGA CCAGTACGTG CGCGTCCACT GGGAGTCGTT CGACGCTCAG
GTGGTGGGCT TTCGCTATTT CAATGTCTAT GGTCCCCGCG AGCAGCACAA GGGCAAGATG
GCCAGCGTCG CCTATCATCA CCACAGTCAG GTGAAGCGGG GCGAGAATCC CAAGCTGTTC
GGTGCCTGGG ACGGCTATGA AGCCGGCATG CAAAGCCGCG ACTTCGTCTA TGTCGGCGAT
GTCGTCGACG TCAACCTGTG GTGCCTCGAT CACCCCGAGG TCTCGGGTAT CTTCAACCTG
GGGACCGGCC GCGCCGAGCC GTTCAAGGCC ATCGCCGAGA CGGTGATCGA TTACTATGCG
ACCGGCAAGA TCGACTACAT CGACTTTCCC GAGGAGCTGA AAGGGCGCTA TCAGAGCTAT
ACCCGGGCGG ATATCTCGCG GCTGCGCGAG GCGGGGTACA AGGCGGAATT CAAGACGGTT
CGCGAAGGCG TCAGCGCCTA CCTGGATTGG CTGAATGGCT GA
 
Protein sequence
MHASRVGARL EGIDDMIVVT GGAGFIGANL VKALNARGRE DVLVVDDLSD GTKFVNLADC 
TLGDYLDKDD FLARVKAELR GEPSELPPIE AIFHEGACSD TTEWDGKFML ENNFEYSKVL
LHFCQYKRIP FLYASSAATY GGSEVFVEAP EHEKPLNVYG YSKLLFDQYV RVHWESFDAQ
VVGFRYFNVY GPREQHKGKM ASVAYHHHSQ VKRGENPKLF GAWDGYEAGM QSRDFVYVGD
VVDVNLWCLD HPEVSGIFNL GTGRAEPFKA IAETVIDYYA TGKIDYIDFP EELKGRYQSY
TRADISRLRE AGYKAEFKTV REGVSAYLDW LNG