Gene Csal_0003 details

Gene Information

• Locus tag: Csal_0003
• Symbol: recF
• ID: 4027322
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chromohalobacter salexigens DSM 3043
• Kingdom: Bacteria
• Replicon accession: NC_007963
• Strand: +
• Start bp: 2832
• End bp: 3917
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637965155
• Product: recombination protein F
• Protein accession: YP_572067
• Protein GI: 92112139
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.1757
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCTCG AACGCCTTAA TTTCCTGGGC CTGCGCAATC TGGCGGCGCT CGACATGCGC 
CCCGGGCCGG GGATCAATCT GATCACCGGG GCCAACGGCA GCGGCAAGAC CAGCTTGCTG 
GAAGGCATGC ATGTGCTGGG AATGGCACGT TCCTTTCGAA CCCAGAAGCT CAAGCATGCG 
ATCGCGCATG ATGCCGATGC CGTCACCCTG CATGGACGCG TCGCCGGCGA TCCACCGGTC 
GCGCTGGGCG TACGCCGTGC ACGCGATGCC TCCGAGCTCG AGATTCGCCT CGACGGCGAG 
CGCGGCGTTC GTGTGGCGCG TCTTGCCGAG GCGCTGCCGC TGCAGCTGAT CAATCCTGAT 
GCCTTTCGTC TGCTGGAAGG CTCGCCGGCG GCGCGGCGAG AGTTTCTCGA TTGGGGCGTG 
TTTCACGTGA AACACGAGTT TTTCGAGGCA TGGCGGCGAG TGCGACGTGC GCTGAAACAT 
CGGAATGCCC TGCTCAGGCA TGATAGAATC GATGCACGTT CGATGCGCGT ATGGGAGCAG 
GAACTCGCGC ATTGGAGCGA GCTTCTGGAC GCCCTGCGCA GCGAGTACAT GGCGCAATTC 
GCCAAGGCAT TCGAAGATAC ATTGCATGAG TTGCTGCCGC TTTCCGGCTT GTCGCTTCGC 
TACTATCGCG GTTGGGACAA GCAGCGTGGT CTGCTGGAGG TGCTCGAAGG CGGTCGGGAC 
ACCGACCGAC AGATGGGGTT CACCCAGCAA GGGCCGCAAC GCGCCGATTT GCGCTTGCGC 
ATCGGCAAGC GTGCTGCCGT GGAGGAGTTG TCTCGCGGTC AGCAAAAGCT GGTGGTGAGT 
GCACTGAAAT TGGCCCAGGG GCGCTTGCTC GATGAACTGA CGGGGCGCAC CTGCGTTTAT 
CTGATCGATG ACCTGCCCGC CGAGCTGGAC GTTACGCATC GGCGGATTTT CTGTCATTGG 
CTGGAGCGCT TGCGCTGTCA AGTCTTTATT ACCAGCGTCG AGCGCGAGGC GCTCGCGAAT 
GCATGGCAGT CGGAAACGGA TGTCGCGATG TTTCACGTGG AACACGGGCG ACTGCTCACG 
GAATGA 

 

Protein sequence

MPLERLNFLG LRNLAALDMR PGPGINLITG ANGSGKTSLL EGMHVLGMAR SFRTQKLKHA 
IAHDADAVTL HGRVAGDPPV ALGVRRARDA SELEIRLDGE RGVRVARLAE ALPLQLINPD 
AFRLLEGSPA ARREFLDWGV FHVKHEFFEA WRRVRRALKH RNALLRHDRI DARSMRVWEQ 
ELAHWSELLD ALRSEYMAQF AKAFEDTLHE LLPLSGLSLR YYRGWDKQRG LLEVLEGGRD 
TDRQMGFTQQ GPQRADLRLR IGKRAAVEEL SRGQQKLVVS ALKLAQGRLL DELTGRTCVY 
LIDDLPAELD VTHRRIFCHW LERLRCQVFI TSVEREALAN AWQSETDVAM FHVEHGRLLT 
E