Gene Nham_4659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4659 
Symbol 
ID4025809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007961 
Strand
Start bp109403 
End bp111076 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content66% 
IMG OID637965138 
Productplasmid partitioning protein 
Protein accessionYP_572046 
Protein GI92109760 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCTCA TCAAGGTCGA TCCGCGCGGG CTGAAGGAAA ATCCCGACCG CCTGCGACAG 
ACGAAGTCCG CGCCGCAGGC CGACGCGCTG CTGCTGGCGA CGATCAAGGC CGTCGGTATC
GTGCAGCCGC CCGTCATCAC GTCGGAATCC GGCGGCGGCA ACGGCTACAT CATCAATTCC
GGGCATCGCC GCGTGAAGCA GGCGATCGCG GCGGGCCTCA AGGAAATCGA CGTGCTCGTC
GACGAGACGG CGGACGACAA TGGCGCCATG CGCTCGATGA TCGAGAACAT TGCCCGTGAG
GCGATGAATC CGGTCGACCA GTGGCGTGCG ATTGAGCGTC TCGTCGCGCT CGGCTGGACC
GAGGAGGCGA TCGGCGTCGC GCTTGCGCTG CCCGTGCGCC AGATCAGGAA GCTGCGCCTG
CTTGCGAATG TGCTGCCGGT CATGCTCGAC CACATGGCCA AGGGCGACAT GCCGAACGAA
CAGCAGCTTC GCACCATCGC CGCCGCCTCG CCTGACGAGC AGAAGGAGGT TTGGAAGAAG
CACAAGCCGT CGAAGGCCGA TCCACAGGTC TCGTGGTGGA GCGTTGCCCA GGCGTTGCAG
AAGACACGCA TGTATGCCCG TCACGCCAAC TTTGGCGCCG ATCTCGCACA GGCCTACGGA
ATCCAGTGGG TCGAGGATCT GTTCGCGCCG GCCGACGAGG ACAGCCGTTA CACGACGGAC
GTCGAAGCGT TTCTCGGCGC GCAGCACGAG TGGATGGCGA ACAACCTGCC GAAGAAGGGC
ATCGTCGCCG AGACCACCAA TTATGGCGAG GTGAAGCTGC CGCTGAAGGC CGAGCGGGTC
TACGGCAAGC CGACCAAGTC GGATTGCACG GCGATGTATC TCGATCGCGA GGGCCGCGTG
CACACGGTGC ATTACCGGAT GCCCGAAGCG AAGAAGCCGA AGGGCAAGGC CGCGTCCGGC
TCGCAGAGCA GCGCAGAGGA TGTCGGCGTG ATCTCGAAGG CCCGTCCCGA TGTGACGCGC
AAGGGTGTCG AGATGATCGG CGATTACCGC ACCGACGCGC TACGCGAAGC GCTTGGCCGG
GCGCCGATCG AGGACGACAC CCTGATGGCG CTGCTGATCC TCGCTTTCGC CGGCCAGAAC
GTGTCCGTCA CCACGGGAAG CGGCGGCGTT AGCTATGGCC ACAGCCGTCT GGCGAAACAC
GCGGCCGTGC TGTTCGACGC CGACGGCACG CTCGACTTCG ACAGGGACAC GCTGCGCGTT
GCGGCGCGCG CCGTGTTGAT CGACGTGTTC TCGTGCCGGG AGAATGCCAC CAACAGCGGC
GTCGTCGCTC GCGTCGCTGG AGCCACGATC GGCGCGGACG AGTTCCTGCC GAACATGGGC
ACCGAGGATT TCCTGTCGTG CCTGTCGCGG CCGGCGCTCG AGGGCTCGTG CAAGAGCACG
CCGGTCCTGC CGCGCCAGCG GGTGCAAGAT ACCCGCGCCG CGCTCGTCGA GCACTTCAAG
GACGAATGTT TCATCCATCC GGCTGCACTC TTTGCGCCCG ATGCGGCGAA GCTCGCCGAA
TGGCTGGCGT CCAGCACGAC GGACGATGCC GATGACGCAG AGGACGGGCT CGACGGCATC
GCCGATGGCT CGTCCGGTGA GGACGCCGAG GCGTTCCGGG AGGCGGCCGA ATAA
 
Protein sequence
MHLIKVDPRG LKENPDRLRQ TKSAPQADAL LLATIKAVGI VQPPVITSES GGGNGYIINS 
GHRRVKQAIA AGLKEIDVLV DETADDNGAM RSMIENIARE AMNPVDQWRA IERLVALGWT
EEAIGVALAL PVRQIRKLRL LANVLPVMLD HMAKGDMPNE QQLRTIAAAS PDEQKEVWKK
HKPSKADPQV SWWSVAQALQ KTRMYARHAN FGADLAQAYG IQWVEDLFAP ADEDSRYTTD
VEAFLGAQHE WMANNLPKKG IVAETTNYGE VKLPLKAERV YGKPTKSDCT AMYLDREGRV
HTVHYRMPEA KKPKGKAASG SQSSAEDVGV ISKARPDVTR KGVEMIGDYR TDALREALGR
APIEDDTLMA LLILAFAGQN VSVTTGSGGV SYGHSRLAKH AAVLFDADGT LDFDRDTLRV
AARAVLIDVF SCRENATNSG VVARVAGATI GADEFLPNMG TEDFLSCLSR PALEGSCKST
PVLPRQRVQD TRAALVEHFK DECFIHPAAL FAPDAAKLAE WLASSTTDDA DDAEDGLDGI
ADGSSGEDAE AFREAAE