Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4659 |
Symbol | |
ID | 4025809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007961 |
Strand | + |
Start bp | 109403 |
End bp | 111076 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637965138 |
Product | plasmid partitioning protein |
Protein accession | YP_572046 |
Protein GI | 92109760 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCTCA TCAAGGTCGA TCCGCGCGGG CTGAAGGAAA ATCCCGACCG CCTGCGACAG ACGAAGTCCG CGCCGCAGGC CGACGCGCTG CTGCTGGCGA CGATCAAGGC CGTCGGTATC GTGCAGCCGC CCGTCATCAC GTCGGAATCC GGCGGCGGCA ACGGCTACAT CATCAATTCC GGGCATCGCC GCGTGAAGCA GGCGATCGCG GCGGGCCTCA AGGAAATCGA CGTGCTCGTC GACGAGACGG CGGACGACAA TGGCGCCATG CGCTCGATGA TCGAGAACAT TGCCCGTGAG GCGATGAATC CGGTCGACCA GTGGCGTGCG ATTGAGCGTC TCGTCGCGCT CGGCTGGACC GAGGAGGCGA TCGGCGTCGC GCTTGCGCTG CCCGTGCGCC AGATCAGGAA GCTGCGCCTG CTTGCGAATG TGCTGCCGGT CATGCTCGAC CACATGGCCA AGGGCGACAT GCCGAACGAA CAGCAGCTTC GCACCATCGC CGCCGCCTCG CCTGACGAGC AGAAGGAGGT TTGGAAGAAG CACAAGCCGT CGAAGGCCGA TCCACAGGTC TCGTGGTGGA GCGTTGCCCA GGCGTTGCAG AAGACACGCA TGTATGCCCG TCACGCCAAC TTTGGCGCCG ATCTCGCACA GGCCTACGGA ATCCAGTGGG TCGAGGATCT GTTCGCGCCG GCCGACGAGG ACAGCCGTTA CACGACGGAC GTCGAAGCGT TTCTCGGCGC GCAGCACGAG TGGATGGCGA ACAACCTGCC GAAGAAGGGC ATCGTCGCCG AGACCACCAA TTATGGCGAG GTGAAGCTGC CGCTGAAGGC CGAGCGGGTC TACGGCAAGC CGACCAAGTC GGATTGCACG GCGATGTATC TCGATCGCGA GGGCCGCGTG CACACGGTGC ATTACCGGAT GCCCGAAGCG AAGAAGCCGA AGGGCAAGGC CGCGTCCGGC TCGCAGAGCA GCGCAGAGGA TGTCGGCGTG ATCTCGAAGG CCCGTCCCGA TGTGACGCGC AAGGGTGTCG AGATGATCGG CGATTACCGC ACCGACGCGC TACGCGAAGC GCTTGGCCGG GCGCCGATCG AGGACGACAC CCTGATGGCG CTGCTGATCC TCGCTTTCGC CGGCCAGAAC GTGTCCGTCA CCACGGGAAG CGGCGGCGTT AGCTATGGCC ACAGCCGTCT GGCGAAACAC GCGGCCGTGC TGTTCGACGC CGACGGCACG CTCGACTTCG ACAGGGACAC GCTGCGCGTT GCGGCGCGCG CCGTGTTGAT CGACGTGTTC TCGTGCCGGG AGAATGCCAC CAACAGCGGC GTCGTCGCTC GCGTCGCTGG AGCCACGATC GGCGCGGACG AGTTCCTGCC GAACATGGGC ACCGAGGATT TCCTGTCGTG CCTGTCGCGG CCGGCGCTCG AGGGCTCGTG CAAGAGCACG CCGGTCCTGC CGCGCCAGCG GGTGCAAGAT ACCCGCGCCG CGCTCGTCGA GCACTTCAAG GACGAATGTT TCATCCATCC GGCTGCACTC TTTGCGCCCG ATGCGGCGAA GCTCGCCGAA TGGCTGGCGT CCAGCACGAC GGACGATGCC GATGACGCAG AGGACGGGCT CGACGGCATC GCCGATGGCT CGTCCGGTGA GGACGCCGAG GCGTTCCGGG AGGCGGCCGA ATAA
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Protein sequence | MHLIKVDPRG LKENPDRLRQ TKSAPQADAL LLATIKAVGI VQPPVITSES GGGNGYIINS GHRRVKQAIA AGLKEIDVLV DETADDNGAM RSMIENIARE AMNPVDQWRA IERLVALGWT EEAIGVALAL PVRQIRKLRL LANVLPVMLD HMAKGDMPNE QQLRTIAAAS PDEQKEVWKK HKPSKADPQV SWWSVAQALQ KTRMYARHAN FGADLAQAYG IQWVEDLFAP ADEDSRYTTD VEAFLGAQHE WMANNLPKKG IVAETTNYGE VKLPLKAERV YGKPTKSDCT AMYLDREGRV HTVHYRMPEA KKPKGKAASG SQSSAEDVGV ISKARPDVTR KGVEMIGDYR TDALREALGR APIEDDTLMA LLILAFAGQN VSVTTGSGGV SYGHSRLAKH AAVLFDADGT LDFDRDTLRV AARAVLIDVF SCRENATNSG VVARVAGATI GADEFLPNMG TEDFLSCLSR PALEGSCKST PVLPRQRVQD TRAALVEHFK DECFIHPAAL FAPDAAKLAE WLASSTTDDA DDAEDGLDGI ADGSSGEDAE AFREAAE
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