Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4656 |
Symbol | |
ID | 4025806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007961 |
Strand | + |
Start bp | 103222 |
End bp | 108324 |
Gene Length | 5103 bp |
Protein Length | 1700 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637965135 |
Product | N-6 DNA methylase |
Protein accession | YP_572043 |
Protein GI | 92109757 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG4646] DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCATG ACGACCCTTT CACCCTCGAC CTCTTCGGCA ACACCGCGGT GTCATCCGGC CTCGGCCTCG GCGTCACCGC CTTCGCTGGC GACACCTTCG ATCCGGACGA TGACGACGAT CCCGATCCGG CTACTCCGGC CCCCGCGATC CCGGTCGCGG CGGTCGCGCG GTCCGCACCA TCCGCGCGGC GCGAGCGCGG CGCAAACTTC CATCTTGCCG GCGACCGCGC CCTGGCGAAG AGCTGGAAGG ACCGCGCCCG CGACAACATC GCCGCCGTTC GCCTCGCAGC CGCGATCGAG GCCGAGGAGC GTCCGGCGAG TCTTGAAGAG CAGAAACAGT TGATCCGCTT CACCGGCTTC GGCGCATCCG AGCTTGCCAA CTTCGTCTTC CGGCGGCTTG GTGAGGCCGC GTTTCGCAAG GGCTGGGAGG AGATCGGCGA GGACCTAGAG GATGCGGTCG GCGATCTCGA CCATGCCTCG CTCGCGCGCT GCACGCAGTA TGCACACTTC ACGCCGGAGT TCATCATCCG CGCGATCTGG CGCGGGCTTC AACGGCTTGG CTGGCGCGGC GGCCGCGTGC TCGAGCCCGG CATCGGCACC GGTCTGTTTC CGGCGCTGAT GCCGGAGGGG TTGCGCAAAA CCTCGCACGT CACCGGCATC GAGCTCGATC CGGTCACGGC GCGCATCGCG GGCCTGTTGC AGCCGCGGGC GCGGATCATC CGCGGCGATT TCGCTCGCAC AGAGCTGCCT GCGAGTTTCG ACCTCGCAAT CGGCAATCCG CCGTTTTCCG ATCGCACGGT GCGCTCGGAT CGCGCCTATC GCTCACGCGG CCTGCGCCTG CATGATTACT TCATCGCCCG GGCGATCGAC CTGCTGAAGC CCGGCGCGCT CGCCGCCTTC GTCACCAGCT CCGGCACCAT GGACAAAGCG GATTCCTCCG CCCGCGAGCA CATCGCCAAA TCCGCAGACC TGATCGCGGC GATCCGCCTG CCCGAGGGCA GCTTCCGCGC CAGCGCCGGC ACGGACGTCG TCGTCGACCT GCTGTTCTTC CGAAAGCGGA AGATCGCCGA ACCCGAAGGC GACCTGTCCT GGCTCGACAT CGAGGAGGTT CGTCCCGCGA TAGAGGACGA AGCTGCCATT CGCGTGAACC GATGGCTTGT GCAGCATCCT GACTTCGTGC TCGGCACGCA CGCGCTCGCC TCTGGACCTT TCGGTGAGAT GTACACTTGC CGTCCGCGCC GCGGCGAGAG TCTCGGCGTG GCGCTCGCCG ACGCCGTCAA CCTTCTTCCG GAAGCGATCT ACGGCGTCGA ACCCGATGTG ATCGACCCTG ATCTGCGGGA CGGAGACGAC CAGACAGGCG CCGATTTGCC GTCTGAGCGG CATGTGCGCG AGGGCAGCTA TTTCTTCGAC AAGGCCCGCG GCTTGATGCA AGTCCTCGAT GGCCAGCCCG TCGCCGTGAA AGTACGCAAC GGCCGCAGCG CCGATGGCAT CCCGGAGAAG CATGTCCGCA TCATCAAAAA GCTGATCCCG ATCCGCGATG CCGTGCGCGG GGTGCTGAAG GCCCAGGAAC TCGACCGGCC GTGGAAGGAG GCGCAGGTCA GGTTGCGCAT TGCCTGGTCG AACTTCGTCC GCGACTTCGG TCCGATCAAC TTCACCACGG TCTCCACGAC GGAAGACGAG GAAACGGGCG AGGTGCGCGA GACGCATCGG CGTCCGAACA TCCAGTCCTT CCTCGACGAT CCTGATTGCT GGCTGGTCGC CTCGATCGAG GATTATGACC TCGAGACCAA TACGGCGAAG CCGGGTCCGA TCTTCACGAA GCGGGTGATC TCTCCGCCCG CGCCGCCGGT CATCACCAGT GCGGCCGACG CCCTTGCCGT CGTTCTGAAC GAACGCGCGC GCGTCGATGT CGACCATATT GCGGAACTCT TGCATCGTGA TGGGCAGGAC GTCATCGCTG AGCTCGGCAG CGCCATCTTC CGCGATCCGG CCGACGGCTC GTGGCAGACG GCCGACGCCT ATCTCTCCGG CCATGTCCGC GACAAGCTGA GGGCGGCAGA GGCCGCCGCG GCGCTTGACC CGTCCTATCA GCGCAATGTC ACCGCGCTTC AGGGCGTGCA GCCTGCCGAT CTGCGGCCCT CCGACATCAC CGCGCGCCTC GGCGCGCCGT GGATTCCGGC CGCCGACATC GTCGCCTTCG TGCACGAGAC GATGGGCGCC GAGATCAAGA TCCACCACAT GCAGGAACTG GCGTCGTGGA CCGTGGAGGC ACGCCAGCTC GGATGGATGG CCGCCGGAAC GTCGGAATGG GGCACCGATC GCCGCCATGC CGGCGAACTC CTGGCCGATG CGCTGAACAG CCGGGTCCCG CAGATCTTCG ACACGATCAA GGACGTCGAC AGTGAGCGGC GTGTGCTCAA CGTCGTCGAC ACCGAGGCGG CGAAAACGAA GCTCTCGAAG ATCAAGGATG AATTCCAGCG CTGGATCTGG TCCGATCCGG ATCGCACCGA CCGTCTGGCG CGGGTCTACA ATGACCGCTT CAACAACATC GCGCCACGAG CCTTCGACGG CTCGCATCTG AAGCTCCCGG GCGCCTCTGG CGCCTTTTCT CTTTATGGGC ACCAGAAGCG CGGCATCTGG CGGATCGTGG CGGCCGGCTC GACCTATCTG GCCCACGCCG TCGGCGCCGG CAAAACCATG ACTTTTGCCG CCGCCATCAT GGAGCAGCGC CGGCTCGGCC TGATCGCGAA GGCGATGCTG GTCGTTCCTG GCCATTGCCT GGCGCAGGCG GCGCGCGAGT TCCTGGCGCT CTATCCCTCG GCTCGCATTC TGGTCGCCGA CGACACCAAC TTCACGAAGG ACAAGCGCCA GCGCTTCCTG TCGCGCGCCG CGACGGCGAC CTGGGACGCG ATCATCATCA CGCATAGCGC GTTTCGCTTC ATCGGCGTCC CGTCGGCGTT TGAGCAGCAG ATGATCCAGG ACGAACTGGA GCTGTATGAG ACCTTGCTGA CCAAGGTCGA GAGCGACGAC CGTGTCTCGC GCAAGCGACT CGAACGGCTG AAAGAGGGCT TGAAGGAGCG GTTGGAGTCG CTCGCGACCC GCAAGGACGA TCTTCTCACC GTCTCCGAGA TCGGCGTCGA TCAGGTCATC GTCGACGAGG CACAGGAATT CCGGAAGCTC TCCTTCGCCA CCAACATGTC GACGCTGAAG GGTGTCGACC CGAATGGCTC GCAGCGCGCC TGGGACCTCT ACGTGAAGTC GCGTTTCATC GAGACAAAGA ATCCGGGCCG GGCGCTCGTG CTCGCCTCCG GCACGCCGAT CACCAACACA CTCGGCGAGA TGTTCTCGGT GCAGCGCTAT CTCGGCTACG CCGCACTGTC CGAGCGCGGC CTGCACGAAT TCGATGCATG GGCGTCGACC TTCGGCGACG TCTCGACAGA GCTCGAGCTC CAACCCTCAG GTAAATACAA GCCGGTCACA CGCTTCGCCA CCTTCGTCAA CGTTCCCGAG CTGATCGCCA TGTTCCGCAG CTTCGCGGAC GTGGTGACGC CGGAGGATTT GCGGCAATAC GTGAAGGTGC CGGCGATCTC GACCGGCAAG CGCCAGATCC TCACCGCGAA GCCGACCGCC GCTTTCAAGC GCTATCAGGT CCTGCTCGAC GAGCGCATCA AGGCCATTGA GGAGCGCGAC CGGCCGCCGG AGCCGGGCGA CGACATCCTG CTCTCCGTCA TCACCGATGG TCGCCACGCG GCGATCGACC TGCGACTGGT CGATGCCGAC GAAGACAGCG AGCCGCACAA CAAGCTCAAC AATCTTATCT CCAATGCAAT CCGCATTTGG CAGGAGACTG CCGGCAACGC CTATATCCGT TCCGACGGCA AGCCGTTTGA GCTCCCCGGC GCCGCGCAGA TGATCTTCTC TGATCTCGGT ACGATCAGCG TCGAGAAAAG CCGCGGCTTC TCGGCCTATC GCTGGATCAG GGACGAACTC GTGCGCATGG GCGTGCCGGC GTCCGAGATC GCCTTCATGC AGGACTACAG GAAGTCCGAG GCAAAGCAGC GTCTGTTCGG CGACGTGCGC GCCGGCAAGG TGCGGTTCCT GATCGGCTCG TCCGACACGA TGGGCACCGG CGTCAACGCG CAGCTTCGCC TGAAGGCGCT GCACCATCTC GATGTCCCTT GGCTGCCCTC GCAGATCGAG CAGCGCGAAG GCCGCATCGT CCGGCAGGGC AACCAGCACG ACGAGGTCGA TATCTTTGCT TACGCCACCG AAGGGTCGCT CGACGCGACC ATGTGGCAGA ACAACGAGCG TAAGGCCCGC TTCATTACAG CGGCGCTCTC CGGTGACACG TCGATCCGGC GGCTCGAGGA CCTCGGCGAG GGACAGGCCA ACCAGTTCGC CATGGCCAAG GCCATCGCGT CCGGCGATCA GCGCCTGATG CAGAAGGCGG GGTTGGAAGC CGATATCGCG CGGCTCGAAC GCCTCCGCGC CGCCCATGTC GACGACCAGC ACGCGATCCG CCGCCAGGTC CGCGATGCCG AGCGCGAGAT CGAGCATGCG ACGCGGCGTA TCGTGGAGAT CGGCCAGGAC ATCGAACAGC TCTCGCCGAC GTACGGCGAG TCCTTTGCGA TGAGCGTGAA GGGACAGCGC TATGTCGAGC GCAAGCAGGC CGGCCGCGCC CTCATGCGCG AGATCCTCAC CCTGATCCAG CTTCAGCAGC AAGGCGAAAC GACCATCGCT TCCATTGGCG GCTTCGATCT TGAATATTCG GGCGAGCGCT TCGGACGCGA TGGCTATCGC TATTCCACCA TGCTGTTGCG AACCGGCGCC GAATACGAGA TCGAATTACC GGTCACGGTG ACGCCGCTCG GCGCGGTCTC CCGCCTCGAG CATGCACTTG CCGATTTCGA GGGAGAGCAA GAGCGCTATC GCCAGCGTCT TGCCGATGCC CGCCGGCGGC TTGTCGCTTA CCAGTCGCGC GAAGGCGGCG ACTTCGCCTT CGCCGGCGAA CTCGCCGGCA AGCGGAGGCA ACTCGCCGAG ATCGACAAAG CGCTTGCCTC GGACATCGAG GGCGCCGGCG AGGCGAGGTC GATCGCTGCT TAG
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Protein sequence | MAHDDPFTLD LFGNTAVSSG LGLGVTAFAG DTFDPDDDDD PDPATPAPAI PVAAVARSAP SARRERGANF HLAGDRALAK SWKDRARDNI AAVRLAAAIE AEERPASLEE QKQLIRFTGF GASELANFVF RRLGEAAFRK GWEEIGEDLE DAVGDLDHAS LARCTQYAHF TPEFIIRAIW RGLQRLGWRG GRVLEPGIGT GLFPALMPEG LRKTSHVTGI ELDPVTARIA GLLQPRARII RGDFARTELP ASFDLAIGNP PFSDRTVRSD RAYRSRGLRL HDYFIARAID LLKPGALAAF VTSSGTMDKA DSSAREHIAK SADLIAAIRL PEGSFRASAG TDVVVDLLFF RKRKIAEPEG DLSWLDIEEV RPAIEDEAAI RVNRWLVQHP DFVLGTHALA SGPFGEMYTC RPRRGESLGV ALADAVNLLP EAIYGVEPDV IDPDLRDGDD QTGADLPSER HVREGSYFFD KARGLMQVLD GQPVAVKVRN GRSADGIPEK HVRIIKKLIP IRDAVRGVLK AQELDRPWKE AQVRLRIAWS NFVRDFGPIN FTTVSTTEDE ETGEVRETHR RPNIQSFLDD PDCWLVASIE DYDLETNTAK PGPIFTKRVI SPPAPPVITS AADALAVVLN ERARVDVDHI AELLHRDGQD VIAELGSAIF RDPADGSWQT ADAYLSGHVR DKLRAAEAAA ALDPSYQRNV TALQGVQPAD LRPSDITARL GAPWIPAADI VAFVHETMGA EIKIHHMQEL ASWTVEARQL GWMAAGTSEW GTDRRHAGEL LADALNSRVP QIFDTIKDVD SERRVLNVVD TEAAKTKLSK IKDEFQRWIW SDPDRTDRLA RVYNDRFNNI APRAFDGSHL KLPGASGAFS LYGHQKRGIW RIVAAGSTYL AHAVGAGKTM TFAAAIMEQR RLGLIAKAML VVPGHCLAQA AREFLALYPS ARILVADDTN FTKDKRQRFL SRAATATWDA IIITHSAFRF IGVPSAFEQQ MIQDELELYE TLLTKVESDD RVSRKRLERL KEGLKERLES LATRKDDLLT VSEIGVDQVI VDEAQEFRKL SFATNMSTLK GVDPNGSQRA WDLYVKSRFI ETKNPGRALV LASGTPITNT LGEMFSVQRY LGYAALSERG LHEFDAWAST FGDVSTELEL QPSGKYKPVT RFATFVNVPE LIAMFRSFAD VVTPEDLRQY VKVPAISTGK RQILTAKPTA AFKRYQVLLD ERIKAIEERD RPPEPGDDIL LSVITDGRHA AIDLRLVDAD EDSEPHNKLN NLISNAIRIW QETAGNAYIR SDGKPFELPG AAQMIFSDLG TISVEKSRGF SAYRWIRDEL VRMGVPASEI AFMQDYRKSE AKQRLFGDVR AGKVRFLIGS SDTMGTGVNA QLRLKALHHL DVPWLPSQIE QREGRIVRQG NQHDEVDIFA YATEGSLDAT MWQNNERKAR FITAALSGDT SIRRLEDLGE GQANQFAMAK AIASGDQRLM QKAGLEADIA RLERLRAAHV DDQHAIRRQV RDAEREIEHA TRRIVEIGQD IEQLSPTYGE SFAMSVKGQR YVERKQAGRA LMREILTLIQ LQQQGETTIA SIGGFDLEYS GERFGRDGYR YSTMLLRTGA EYEIELPVTV TPLGAVSRLE HALADFEGEQ ERYRQRLADA RRRLVAYQSR EGGDFAFAGE LAGKRRQLAE IDKALASDIE GAGEARSIAA
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