Gene Nham_4617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_4617 
Symbol 
ID4025767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007961 
Strand+ 
Start bp71429 
End bp72160 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content58% 
IMG OID637965103 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_572011 
Protein GI92109725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATGTGC ACAAGGCGAC GGTTTGCGTG GCGATTGCCG AGAGCGGCCG CGGAGGCGAG 
GTACGAGAGG TTGGCGCATT CGAGAACCGC CCCGACGTCC TACGCAAAAT GGTGGCTCGG 
CTTGGTAAGC AGAGACCTCG CCTCAATTTC TGCTACGAAG CTGGTCTTTG CGGATATGGA 
CTTCACCGTT TGCTGATCGG TTTGGGGCAC GACTGCGTCG TGGTGGCACC ATCGCTGATT 
CCGATGAAGG CGGGCGACCG GATGAAGACC GATCACCGGG ACACTTTGAT GCTGGCGAAG 
CTGCATCGTG CCGGCGAACT GACGCCGATC TGGATATCCG CTCAGCCGGT TGTTCCGCTC 
GGCCGGTTTC GAGATGACCC AGCCCCGAAC GGAGTATGCA GACGGTCCCT GGCTGATGAC 
TTACATGTAT TTGGGAGAGC ACACCCGTCA TCAAACGTAT CCAGAGGCGG TATCATGCAC 
GCCCAGGCAG AAGCAAATGA CTGCAAATCT TGTGGTCTGC AGCAAGTGCG GCACAGTCGA 
TCGCCTGCTG CCGTCGCGTC CGGCCATGGA CGCCAAATGT GGGGAGATGC AGAGTCAAAC 
TGTTCCCGAG AATGTCAATG CCGAGATTTT CAAGGCCGGA CTGTCATCCG GAAACAGAAG 
AATACACCCG CGAGCGCGAA GCTCGATCCT TCAGGGCCGC GAGTAGTCGC CGCCAGCAGA 
AATTTCAGCT AA
 
Protein sequence
MDVHKATVCV AIAESGRGGE VREVGAFENR PDVLRKMVAR LGKQRPRLNF CYEAGLCGYG 
LHRLLIGLGH DCVVVAPSLI PMKAGDRMKT DHRDTLMLAK LHRAGELTPI WISAQPVVPL 
GRFRDDPAPN GVCRRSLADD LHVFGRAHPS SNVSRGGIMH AQAEANDCKS CGLQQVRHSR 
SPAAVASGHG RQMWGDAESN CSRECQCRDF QGRTVIRKQK NTPASAKLDP SGPRVVAASR 
NFS