| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4602 |
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| Symbol | |
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| ID | 4025370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007961 |
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| Strand | + |
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| Start bp | 55920 |
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| End bp | 56873 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637965094 |
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| Product | esterase, PHB depolymerase |
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| Protein accession | YP_572002 |
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| Protein GI | 92109716 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.462256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGGTC TATTGAACCT ATTCGCGTAT ATGCAAGGAA GCAACGACAC GAGCGATCGT
CTGTCGAACT TGGTCGGATT TGGAACGAAT CCGGGATCGT TGCGGTCTCT GACGCATATA
CCGGAAAACT TGCCCGATGC TGCACCGCTT GTAGTCGTGC TGCATGGCTG CGAGCAGACG
GCGACGGACT ATGACCGCGG CTCCGGTTGG TCAGAGCTTG CCGACCGGCA TGGGTTTGCG
TTGCTGTTCC CCGAGCAGCG GCGCTCGAAC AATTGGCTTC TCGCTTTCAA TTGGTTCGAG
CCGTGCGACA GCCACCGTGA CTCCGGCGAA CCCCTGTCAA TCCGCCAGAT GATCGAGCAG
GTGGTCAGCG ATCATGGGAT CGATCGTCAG CGCATCTTTG TCACCGGCTT GTCTGCTGGC
GGCGCGATGG CCTCGGTCTT GCTCGCGACG TATCCGGAAG CCTTTGCCGG TGGCGCGATC
ATCGCCGGGC TGCCGTACGG GTGCGCGAGC ACGATTCCGG ACGCATTCCG TCGAATGCGG
GGACAGCGTG GCGGCCCGAC AGCACAACAG CTTGCAGCAC GGCTGCGCGA CGCTTCGGAG
CATGACGGAC CTTGGCCGAC GATCTCGATC TGGCACGGCA GTCGCGACCG CACCGTTGAT
CCTTCGAACA GCGAGGAGAT CCTCCAACAG TGGCTTACGC TTCATGACCT TGAACGAATG
CCAAGCCGCG CTCACATCGT CGACGGTTAT CCCAGGCGGG TCTGGAGCGA TCCCGAGGGT
CATGAACTTC TGGAGGAATA CCGCATTACC GGGATGGGCC ACGGCATACC GCTCAACACG
AGTGGCCGCC ACGGCTGCGG CTCGAGTGGC GACTACATGC TGGACGTGAA TATCTCGTCA
ACACGCCACA TCGCCGCCTT CTGGGGTTTG AGGGCGGTCG GCGCAGCGGA CTGA
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| Protein sequence | MLGLLNLFAY MQGSNDTSDR LSNLVGFGTN PGSLRSLTHI PENLPDAAPL VVVLHGCEQT
ATDYDRGSGW SELADRHGFA LLFPEQRRSN NWLLAFNWFE PCDSHRDSGE PLSIRQMIEQ
VVSDHGIDRQ RIFVTGLSAG GAMASVLLAT YPEAFAGGAI IAGLPYGCAS TIPDAFRRMR
GQRGGPTAQQ LAARLRDASE HDGPWPTISI WHGSRDRTVD PSNSEEILQQ WLTLHDLERM
PSRAHIVDGY PRRVWSDPEG HELLEEYRIT GMGHGIPLNT SGRHGCGSSG DYMLDVNISS
TRHIAAFWGL RAVGAAD
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