| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4533 |
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| Symbol | |
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| ID | 4025301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 179210 |
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| End bp | 182419 |
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| Gene Length | 3210 bp |
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| Protein Length | 1069 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637965036 |
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| Product | heavy metal efflux pump CzcA |
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| Protein accession | YP_571944 |
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| Protein GI | 92109657 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATG GAATTTTGTC ATTCGCCATC CGGCAGCGTT GGCTGGTCAT GATAGGCGTG
CTGGCGATGG CGGCCTTCGG CGCCTGGAAT TTCACCCGGC TGCCGATCGA CGCGGTGCCG
GACATCACCA ACGTCCAGGT CCAGATCAAC AGCAGCGCGC CTGGTTATTC GCCGCTGGAG
GTCGAGCAGC GGATCACGTT TCCGATCGAG ACCGCAATGG GTGGGCTGCC GCATCTCGAC
AGCACGCGCT CACAGTCACG TTACGGCTTG AGCCAGGTCA CGATCATCTT CAAGGATGGG
ACCGACATCT ATTTCGCCAG GCAATTGGTC AACGAGCGCA TCCAGCAGGT CAAGGATCAA
CTGCCCGCCG GCGTCGAGAC CGCGATGGGG CCGATCTCGA CGGGACTCGG CGAGATCTAT
TTATTCACGG TCGAAGCGAA GCCCGGCGCC CGCAAGGAGG GCGGCGGCGA TTATACGCCG
AGCGACCTGC GAACGATCCA GGACTGGATC ATCAAGCCGC AGTTGCGCAA CGTCCCGGGG
GTCATCGAGG TCAACACGAT CGGGGGCTTC GAGAAGCAAT TCCATGTGCT GCCGGACCCG
GCGCAACTGA TGGCCTACAA GCTCAGCTTC CGCGACGTGA TGACGGCGCT GGCGTCGAAC
AACGCCAATG TGGGTGCAGG CTATATCGAG CGAAATGGCG AGCAATATCT TGTTCGGACA
CCGGGCCAGG TGGCGAACGT CGAGGACATC AAGGAAATTG TCATCGGCTC TCACAATGGC
GTTCCGGTTC GGATCGGAGA CGTTGCCGAG GTGAGGGAGG GCAAGGATTT GCGAACCGGC
GCGGCCACGG TCAATGGCAA GGAAACCGTT CTCGGAACCG TCATGCTGCT GATCGGCGAG
AACAGTCGCG CCGTTGCGCA GCGGGTTGCT GCCAAACTCA AGGAGATCGG CCGATCGCTG
CCGGATGGCG TGATCGCACG CGCGGTATAT GACCGGACGC ACCTCGTCGA GGCGACAGTT
GCGACCGTGG AGAAAAACCT GGTCGAAGGT GCGCTGCTCG TCATCGTGAT CCTCTTCATG
ATCCTGGGAA ATTTCAAAGC GGCGATCGCG ACCGCATGCG TGATTCCTCT CGCCATGCTG
TTCACGATCA CAGGCATGGT GGAGAACAAG GTCAGCGCCA ACCTGATGAG CCTCGGCGCC
ATTGACTTCG GCATCATCAT CGACGGTGCA GTCATCATCG TCGAGAACTG CCTGCGGCTG
CTGGCGGAAG AACAGCATCG GCAGGGCCGA TTGCTCAATC GTCAGGAACG GTTCGAGACC
ATTCTTGCCG GGTCTAGGGA GGTGATCGGT CCCAGTTTGT TTGGAACCTT GATCATCGGC
GTGGTCTACC TGCCCATCCT CACGCTGACT GGCGTCGAAG GCAAGATGTT CACGCCGATG
GCCTTGACGG TCCTGATGGC GCTCACCGGC GCCAGCATCC TGTCGCTCAC CTTCGTGCCG
GCTGCGGTCG CCCTCTTGGT GACCGGAAAG GTCTCCGAAC ACGAAAACGT TTTCATGCGC
GGCGCGCGAA AGCTCTACAC GCCGTTGCTG GCCGCCTCAA TCCGTAACCG TTTCGGTGTC
GCCGCCATCG CCGCGTTGCT GGTCGTCGTC TGCGGCATTG CCGCGACGCG CATGGGCGGT
GAATTCATTC CCAGCCTCGA CGAGGGGGAT GTCGCGCTGC AGGCAATCCG GATACCGGGA
ACGAGCCTGA CCCAGTCGCT GGAAATGCAG GCGATGCTCG AAAAGCGGCT GCTGAAGATC
CCGGAGGTCA AGGAGGCCTT CGCACGAACC GGCACCGCAG AAGTCGCGAC CGATTTGATG
CCACCGTCGA CTTCGGATGG TTACGTAATG TTGAAGCCGC GCAAGGAATG GCCTGATCCG
GAGAAGAGCA AGGCCGCGGT GGTTCGCGAA ATCCAGGAAG CCGCCGAAGA AATTCCGGGC
AACGTTTATG AGATATCGCA GCCCATCGAG CAGCGTTTCA ACGAGCTGAT CTCCGGTGTC
CGCAGCGACG TCGGAATCAA GATTTTTGGC GATGACCTCG ACACACTGGT CCAGTCGGCG
GCGAAGGTGC AAGCCGTGTT GCAGAACGTT GAAGGCGCAG CCGACGTCAA GACCGAACAA
GCCTCGGGCT TGCCGGTATT GACCGTGAAG CTCAATCGAC AGGCCTTGTC GCGATACGGA
ATCAATGTGT CGGATGTCCA GAATTTGATC GAAATCGCTG TCGGGGGAAA ACCCTCCGGC
CTTGTCTTTG AGGGGGATCG GCGCTTCGAC ATCGTGGTTA GGCTTCCGGA GCATTTGCGC
TCTGACATGG AAGCGATCCG AGCGCTGCCG GTGCCGTTGC CTCCGCTGGA GAACAACGCC
AAGGCAACAC CAGCGGTCTG GAACAACTCG CCGCTTGCTC AGATCCGGTA TGTGCCACTT
TCCGAACTTG CCGAAATCGA CGTTGCGCTG GGTCCCAATC AGATCAGCCG CGAAAACGGC
AAGCGGCGCA TCGTGGTTAC CGCCAACGTG CGCGGCCGTG ATCTCGGGTC ATTCGTTGCC
GACGCACAGA AACAGGTCGA GGAGAAAGTG AAACTGCCGG CCGGCTACTG GATCGGGTGG
GGCGGCCAAT TCGAACAGCT TGTTTCCGCC ACGCAACGAT TGACGATCGT CGTGCCGATC
GCGCTTTTGC TGATCCTTTT GCTCCTGTTT ATGAGCCTGG GATCAATGGC CGATGCGTTG
CTGGTGTTCA GTGGTGTGCC GCTCGCACTG ACGGGCGGCA TCGTGGCACT CCTGCTGCGC
GGCATCCCAT TGTCGATCAG CGCTGGGATC GGCTTCATCG CGTTGTCCGG CGTAGCGGTG
CTCAATGGTC TGGTCATCAT TACCTTCATC GAGGGTCTGA GGCGAGAAGG ACATGCCCTT
GTCGACGCGG TCCGCGAAGG GGCGCTGACT CGGTTGCGGC CCGTGCTGAT GACGGCGCTG
GTCGCCTCGC TCGGCTTTGT GCCGATGGCG ATTGCTACCG GTGCGGGCGC CGAGGTGCAG
CGGCCGCTGG CGACCGTGGT GATCGGCGGA ATCATCTCCT CAACGATCCT GACATTGCTG
GTGTTGCCCG CCCTCTACGT CTTGTTCAGG CGGGAAGAGC CGGAAAATGG CGGCTCGAAC
TTGCCCACGG TGGGAGGCGT AAACCCATGA
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| Protein sequence | MIDGILSFAI RQRWLVMIGV LAMAAFGAWN FTRLPIDAVP DITNVQVQIN SSAPGYSPLE
VEQRITFPIE TAMGGLPHLD STRSQSRYGL SQVTIIFKDG TDIYFARQLV NERIQQVKDQ
LPAGVETAMG PISTGLGEIY LFTVEAKPGA RKEGGGDYTP SDLRTIQDWI IKPQLRNVPG
VIEVNTIGGF EKQFHVLPDP AQLMAYKLSF RDVMTALASN NANVGAGYIE RNGEQYLVRT
PGQVANVEDI KEIVIGSHNG VPVRIGDVAE VREGKDLRTG AATVNGKETV LGTVMLLIGE
NSRAVAQRVA AKLKEIGRSL PDGVIARAVY DRTHLVEATV ATVEKNLVEG ALLVIVILFM
ILGNFKAAIA TACVIPLAML FTITGMVENK VSANLMSLGA IDFGIIIDGA VIIVENCLRL
LAEEQHRQGR LLNRQERFET ILAGSREVIG PSLFGTLIIG VVYLPILTLT GVEGKMFTPM
ALTVLMALTG ASILSLTFVP AAVALLVTGK VSEHENVFMR GARKLYTPLL AASIRNRFGV
AAIAALLVVV CGIAATRMGG EFIPSLDEGD VALQAIRIPG TSLTQSLEMQ AMLEKRLLKI
PEVKEAFART GTAEVATDLM PPSTSDGYVM LKPRKEWPDP EKSKAAVVRE IQEAAEEIPG
NVYEISQPIE QRFNELISGV RSDVGIKIFG DDLDTLVQSA AKVQAVLQNV EGAADVKTEQ
ASGLPVLTVK LNRQALSRYG INVSDVQNLI EIAVGGKPSG LVFEGDRRFD IVVRLPEHLR
SDMEAIRALP VPLPPLENNA KATPAVWNNS PLAQIRYVPL SELAEIDVAL GPNQISRENG
KRRIVVTANV RGRDLGSFVA DAQKQVEEKV KLPAGYWIGW GGQFEQLVSA TQRLTIVVPI
ALLLILLLLF MSLGSMADAL LVFSGVPLAL TGGIVALLLR GIPLSISAGI GFIALSGVAV
LNGLVIITFI EGLRREGHAL VDAVREGALT RLRPVLMTAL VASLGFVPMA IATGAGAEVQ
RPLATVVIGG IISSTILTLL VLPALYVLFR REEPENGGSN LPTVGGVNP
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