| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4531 |
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| Symbol | |
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| ID | 4025299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 177912 |
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| End bp | 178862 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637965034 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_571942 |
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| Protein GI | 92109655 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGG CAACTCTCCG CTACTCCATA TTCATACTGG TTGCCGTCGC GCTGGCCTAC
GGCGGCTATC GCATGCTGAT GCCGGCAAGC TCAAAAGTCA CACCCACCGA GAAATCGGAC
AAGGACGAGC ATTCAGACAG CGTCATCCTG AGCGATGCCA AAGTGGAGGC TTCAAGGATC
GAGCTTGCGA CAGCCTCATC CGGCGTGCTG CGCGAAAGCC TTTTCCTCAA CGGCATCGTC
CAACCGAATC AGGAATCGCT GGTCCAGGTT ACGCCGCGGT TCCCGGGGAT CGTCCGCGAC
GTTCGCAAGC GGATCGGCAA TGCCGTCCAG AAGGGTGATG TCCTTGCAGT CATCGAAAGC
AACCAGAGCC TGACCCAGTA CGAATTAAAG GCCTCGCTGG CCGGAACGGT GATCGACCGC
CAGATCACGT TGGGCGAGTA CGCCTCCGAA CAGAAGCCCG CTTTCTTGGT CGCGGATCTG
TCGACGGTGT GGGTCGATTT TTCGGTCTAT CGGCGCGATC TCAAGCGGGT CAGCGTCGGT
GACCAAGTGT TTATCGACCC AGCGGACGGC GGCGCGCCAA TCGATGCGAA AATTTCCTAT
CTCTCCCCGG TTGGCAGCAG TGACACCCAG AGCGCGATCG CCAGGGCAGT GGTTCCGAAT
ACCGGACAAC GGCTTCGCCC GGGCCTGTTC GTCACCGGTC GTTTGATGCT CACCGCGAAA
AAGGTCGGCG TCGCGGTGAA ATCGTCGGCG TTGCAGACCG TGGAAAACCG CACGGTCGTC
TTCGTTCGCA ACGGCGAAAA GTTCGAGGCA CGAAACGTTG AGATCGGTGA ACGCGATCCG
CAGCTCGTCG AGATCACCGT CGGCATCCTG GAAGGCGACG TCTATGCGGC CAAAAACAGC
TTCATCGTGA AGGCTGAGAT GACGAAAGGA GCGGGCGGCG ATGAACACTG A
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| Protein sequence | MIKATLRYSI FILVAVALAY GGYRMLMPAS SKVTPTEKSD KDEHSDSVIL SDAKVEASRI
ELATASSGVL RESLFLNGIV QPNQESLVQV TPRFPGIVRD VRKRIGNAVQ KGDVLAVIES
NQSLTQYELK ASLAGTVIDR QITLGEYASE QKPAFLVADL STVWVDFSVY RRDLKRVSVG
DQVFIDPADG GAPIDAKISY LSPVGSSDTQ SAIARAVVPN TGQRLRPGLF VTGRLMLTAK
KVGVAVKSSA LQTVENRTVV FVRNGEKFEA RNVEIGERDP QLVEITVGIL EGDVYAAKNS
FIVKAEMTKG AGGDEH
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