| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4527 |
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| Symbol | |
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| ID | 4025295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | + |
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| Start bp | 173229 |
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| End bp | 175466 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637965031 |
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| Product | hypothetical protein |
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| Protein accession | YP_571939 |
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| Protein GI | 92109652 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.820483 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGGACG AGGACGTCCG CGCGAGGCGA GCACGGGTCG CGCCGCTTCC CAATACGCCG
CCGGCACAAG ACATCATTCG CGGCGCGACA ATCACGGGTG AGCGGGACGA GGAACGGGCG
CGCTCGATCG CGGCCGTGGG CGGGGGTGGC GGCGCGGGAC CTGGGGCCGC GCCACTGCGT
GGCGCGCCGA GCCCGATCTC CGGAGGATTC GGTGCTAGCG GGGCCGCAAC GAGCTCGGCC
GGGGCAGGGC AGGGCGGCCC CGTTGGCCGA GCTCGGCAAC TCGCTGCCGG CTACCAGCCC
GCTGTCATCA AGGTGGTGTC CTATGCGCGC GGCGTCGCGC GCGCCACGGC GACCGGCCAA
TATGTCCAGC GCGAAGATGT TCCGCTCGAG ACCCATGACG GGCGATTGTT GACGGACCGG
GAAGCTGTGG CCGACGAGAT CAAGGCCTGG TCTGCGGACT TTTCGAAGCG TGCGGAGAGC
CAAGACGTTG GCGCATTCCG TCTGAAGCTT GAAGGTGTGC CGGATACCGC CGAAGGCCGA
GCGACCTACG AGAAGGCGAT CGCGGCTGCC TTCTCCGGAC ATCGCTACGC TGCTCGCGTC
GACGTCGACG AAAAGGGCGC GCTCGAGGCG CACGTCGTCG CCGCGATGGC CGGGAGCGGC
AAGGAACGGT TTCGCATTCG AGAGGCCCAG GCCGCCGATC GGAATCATGA CGCCAGACCA
CGCCGTCTCG ATTCCGTTTC CGATGCCGCT GTTCGCGCCA GGATCGAAGC AGCTTCGGGC
ATTGACGGGA AAGCTGTGGT AATCCGACCC GGGGCGACCA GCCATGGTCG AGACGGCGTC
AGCTATAGGC TCAATAAGCT GATCGAGAAG AGCGCAGCAC TCGACGACCG CGGCAAGAGC
TTGTGCAACG TGGCAGATGC GCGGGTCACC GCCCGCGAAT GGGGTCCGTC GCTTCGGTCA
CAATCCGCGC GCGATACGAT GCACTTGATC ATTTCGGCAA AGGCCGGAAC GGATGTGGCC
GCCTTGACCA ACGCGGCGCG TGCGTTCCTG CACGACCGTT TTGCCGACCA TAAGTTCATG
TTCGGCGTTC ACACGGACAA GGAATCGGCC GGGCATATCC ACGCTCACGC CGTCATTACC
GTGAAGAACG AATCCGGCCA GAAGATCCAT CCCAATCGGG ATACGTTCGC GGAATGGCGC
GAGGTGTATG CGCAACACGC TCAGGCACAA GGCTTGAAGA TCGTCGCGAC CTCGGCGAAG
GAGCGGGCTT CCTCGCAAAG CTATGGTCCC AAGGACAAGG CGATCGTCGA AGCGGCGGAT
CGGCCGCGTG CCGCGCGCGA AGCCCGCGAT CGCGCCTACG CCGCCGATCC CTTCAATCAA
CGTCTCATCG ACAATGCGCG GCAGCGGATC CGGGTAGCGA GGACCAATCC CATCCGCCTT
CCCATGTCGG CGCCCGATCG CAAAGTCGTG AACGAGAGCC TCCTCGCCTG GAAGACTGTA
GCTGCCGAGC AGCCTTCTAA CGGCGCCGCA AAGGATATGC TCGAGCGCCT GTTGATGGCG
CAGACCGTTG GGGCCATCTT GCATACGATC GGCAAGCGCG TGGAGTTTTT GACCAGGGAG
AGCGAAATGC CAATTACATC GGAGCAAATG CTCCAAGATC AGCGGCTCAT GAACGATGCG
GTTTCCCGGA CCAGCGATCG CTTGGATGGA GAGACGAAGC AACAATTTCG CCAGACGTCG
GCGCGCTACC TGGAAACGCT CGCCAATCGC ATTGATCTGC AGCGCATGCA GGAACGTGGC
GTACAGCAGC TCAGCCGGGC GGACGTCGAA GCCGTTGTTG GCGTGAACGC CGATCGGCTC
ATCGAGCGCG CCCAAGAGAT TCGGATCAAG GAAGAGCGCG AGGCGACGTC CGCGGAACAC
CTCGCAACCA GTGCAATCGA TGCCGAGCGG CGGCAGGAGG CGCGAGGGGG CATTGATCCT
GCTTCACAGA AGGAGTTGAG GGCGGAAAGG GCCATTGTTG CCGGTTCGCA ACAATCTGCG
GCGCGAGAAG CGCGGGAGGC GGCCGCGGCC GTTGAAGCGG CGCGGGCTAT CGCTGAACAT
CCGGCGCAGC CATTGCCAAC AAGTCTGGTC CAGACGGATG CCCTGACGAA GCTCCGTCTA
GAGCAGGAAA AGATCGTTAG CGAGCTCGAG GCTCAAAGGT CCGAGGCCCA ATCGTCAAAG
GGCCAGCGCT ACAGGTGA
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| Protein sequence | MLDEDVRARR ARVAPLPNTP PAQDIIRGAT ITGERDEERA RSIAAVGGGG GAGPGAAPLR
GAPSPISGGF GASGAATSSA GAGQGGPVGR ARQLAAGYQP AVIKVVSYAR GVARATATGQ
YVQREDVPLE THDGRLLTDR EAVADEIKAW SADFSKRAES QDVGAFRLKL EGVPDTAEGR
ATYEKAIAAA FSGHRYAARV DVDEKGALEA HVVAAMAGSG KERFRIREAQ AADRNHDARP
RRLDSVSDAA VRARIEAASG IDGKAVVIRP GATSHGRDGV SYRLNKLIEK SAALDDRGKS
LCNVADARVT AREWGPSLRS QSARDTMHLI ISAKAGTDVA ALTNAARAFL HDRFADHKFM
FGVHTDKESA GHIHAHAVIT VKNESGQKIH PNRDTFAEWR EVYAQHAQAQ GLKIVATSAK
ERASSQSYGP KDKAIVEAAD RPRAAREARD RAYAADPFNQ RLIDNARQRI RVARTNPIRL
PMSAPDRKVV NESLLAWKTV AAEQPSNGAA KDMLERLLMA QTVGAILHTI GKRVEFLTRE
SEMPITSEQM LQDQRLMNDA VSRTSDRLDG ETKQQFRQTS ARYLETLANR IDLQRMQERG
VQQLSRADVE AVVGVNADRL IERAQEIRIK EEREATSAEH LATSAIDAER RQEARGGIDP
ASQKELRAER AIVAGSQQSA AREAREAAAA VEAARAIAEH PAQPLPTSLV QTDALTKLRL
EQEKIVSELE AQRSEAQSSK GQRYR
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