| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4517 |
|---|
| Symbol | |
|---|
| ID | 4025285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007960 |
|---|
| Strand | + |
|---|
| Start bp | 163691 |
|---|
| End bp | 164896 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637965021 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_571929 |
|---|
| Protein GI | 92109642 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | [TIGR03453] plasmid partitioning protein RepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACGT CAGCGAAGCC ACTCGACGAG AACGTGCGTG ACCTCCGCTC CCTGATCAAT
GCGGACGCAG CGGAGCTTTC GGCGCGACTC CGCGCCCAGC AGCTTCGCGA TTTCCCGCCG
GCGGCTGAGA AGACGATTCG TCGGTTTTCG TCGGCGGAAG CAGCGCGCTT CATCGGCATA
GCTGAAGGCT ATCTTCGGCA ATTGGTGTCC GAAGGAAAGG GCCCTTCAGC ACCAGCGAAC
AGCCGTCGGA GTTATTCGAT CGAAGACATC GATGCGTTAC GCCGCGACCT CGACAGCGCT
GGCAAAGGTG CTCGTCGCTA CGTTCCGCAC CGGCGCGACA CCGAGGCGCT CCAGGTCATT
TCGGTCATGA ATTTCAAGGG CGGCAGCGGC AAGACCACGA CCGCCGCCCA CCTCGCGCAG
TATCTCGCGT TTCGAGGCTA CCGCGTCCTG GCCATTGACC TCGATCCGCA AGCAAGTCTG
TCAACACTGT TCGGGCACCA GCCCGAACTC GATGTCGGCG ACAACGAGAC AATCTTCGGT
GCCATCCGCT ACGACAGCGA GCGCCGTCCA ATGCCGGAGA TCGTGCGCGC CACCTACATT
CCGAATCTCC ACATCGTTCC GGGTCAGCTC GAACTCATGG AATTCGAGCA CGAGACACCC
AAAGCTTTGA TGACGCGACA GAGCAACGAC TCGATGTTCT TCGCCAGAAT CGGCGAAGCG
CTGGCGCAGG TCAGCGACGT CTACGATGTC GTGGTGATCG ATTGCCCTCC ACAACTAGGC
TTCCTCACCC TGTCTGCACT CTGCGCCGCG ACAGCAGTTT TGATTACCGT CCATCCTCAG
ATGCTCGACG TGATGTCGAT GTCGCAATTC CTGAACATGA CCGGAAGTCT GCTTGATGTC
GTCGCCGAGG CCGGAGGCGC GACCCAATAC GATTGGATGC GCTATCTCGT CACCCGTTAT
GAGCCTAGTG ACGGCCCACA AACGACCATG GTTGGTCTCA TGCGTTCCAT CTTCGGCTCA
CGCGTGCTGA CCCACCCGAT GGTAAAGAGC ACCGCCATCG CAGATGCCGG GCTCACAAAG
CAGACCCTGT ACGAGGTCGA ACGACAGCAG TTTACGCGCG GCACGTACGA CCGCGCCATC
GAAGCCTTGG ATCTCGTGAA CGGAGAAATC GAAAGCCTCA TCAAGCAGGT CTGGAAGAGG
AATTAG
|
|---|
| Protein sequence | MPTSAKPLDE NVRDLRSLIN ADAAELSARL RAQQLRDFPP AAEKTIRRFS SAEAARFIGI
AEGYLRQLVS EGKGPSAPAN SRRSYSIEDI DALRRDLDSA GKGARRYVPH RRDTEALQVI
SVMNFKGGSG KTTTAAHLAQ YLAFRGYRVL AIDLDPQASL STLFGHQPEL DVGDNETIFG
AIRYDSERRP MPEIVRATYI PNLHIVPGQL ELMEFEHETP KALMTRQSND SMFFARIGEA
LAQVSDVYDV VVIDCPPQLG FLTLSALCAA TAVLITVHPQ MLDVMSMSQF LNMTGSLLDV
VAEAGGATQY DWMRYLVTRY EPSDGPQTTM VGLMRSIFGS RVLTHPMVKS TAIADAGLTK
QTLYEVERQQ FTRGTYDRAI EALDLVNGEI ESLIKQVWKR N
|
|---|
| |