Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4476 |
Symbol | |
ID | 4025487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007960 |
Strand | + |
Start bp | 118388 |
End bp | 123499 |
Gene Length | 5112 bp |
Protein Length | 1703 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637964982 |
Product | helicase-like |
Protein accession | YP_571890 |
Protein GI | 92109603 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG4646] DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCAGA AAGACCCATT CACGCTTGAT CTCTTCAACA ACACCTCCCT GTCGTCGGGC CTCGGTCTCG GCGTCACGGC GTTTGCGACG TCCGTTGAAG GTGAAGACCC GGATCGCGAT CCGTCTTCAC CATCCTCGCC CGCCATCTCT CCTATGACAG TCGTTCAGTC GGAAACCGCG CGTGTCGCAG GCGAGAACTT CTATCTCGCC GATAGCCGGG GCCTGGCGGC CTCCTGGCGC GACCGCGCGC GCGACAATCT GGTCGCTATC CGTCTCGCAG CGGACCTCGA AGCCGAACAA CACCCGGCCA CGTCCGACGA GCAGGCGCAA CTCATCCGTT TCACAGGCTT CGGCGCTTCG GAGCTCGCCA ACGGCGTGTT TCGCCGCCCC GGCGAGGATG GATTCCGCAA AGGCTGGGAA GTGATTGGGC AACAGCTCGT GGAGCTTGTC GGCACGGCCG ACTACGCCTC TCTCGCCCGT TGCACCCAGT ATGCTCACTT CACGCCGGAA TATATCGCTC GTGCTGTGTG GGCGGGCGCT TTGCGCCTCG GCTTTCGCGG CGGCCGGGTT CTCGAGCCCG GCATCGGAAC GGGTTTGTTT CCTGCGCTGA TGCCGAAGGC ACTTCGCGAC GTCAGCCATG TCACCGGCGT CGAGCTCGAT CCGATCACAA CGCGGATCGC CAAGTTGTTG CAGCCGCGTG CGATGATCGT GAACGAGGAC TTCGCACGCA GCAGCCTGAA GCAGCATTTC GATCTCGCGA TCGGCAATCC GCCCTTCTCC GATCGCACCG TGCGCAGCGA CCGCGCGTTC CGCTCGCTTG GCCTGCGGCT CCACGACTAC TTCATCGTAA AGGCCATCGA CCGGCTGAAA CCCGGCGGCA TCGCCGCGTT CGTGACATCG CACGGCACGT TGGACAAAGC CGACGCCACG GCGCGAGAGC AGATCGCGGC GATGGCCGAT CTCCTCGGTG CGATTCGCCT GCCCGAAGCC AGCTTCCGCG CCGACGCAGG CACCGACGTC GTCGTCGATA TCCTGTTTTT CCGAAAGCGC CGGAATGGGG AGACCGTTGC GAACGACGCG TGGCTCGACC TGTCCGAGGT CCGCGCGGCA ACGGAGGACG AGGGCGCAAT CCGGGTCAAT CGGTATTTTG CCGAACGTCC CGACATGGTC CTCGGTGAGC ATGCGCTGCG GCGCGGCGTC TACGGGCCCG ACGAGACTTA TACCTGTCTA TCGCGCGTGG GGAGCGATCT CGAGACCGCG CTCACCGCCG CCGTCCTCCA GCTTCCGGAA GCAGTCTACG ACGGCGAGCC GGAGGCGGTC CGTTCCGATC ACGCCGAGCC GTCCGCCGCC ACGGGCCGCG AACCGCAGGC CTCTGCCGTT CGCGAGGGCA GCTATTTCGT CGGAACGAAT GGCGCCCTCA TGCAGGTAGT CGACGGCGTG GCGGTGACCA TCACGGTCAG AAAGGGCCGT TCGACCGATG GCATCTTCGA GAAACACGCC CGCATCATTC GCAAGCTCAT CCCGATCCGC GACGCCGTTC GTGAAATCCT CAAATGCCAG GAGACCGATC AGCCCTGGAA GCAGGCGCAG GTGCGTTTAA GGATCGCCTG GTCGAGCTTC GTGCGCAACT TCGGGCCGAT CAACACCACG GTCGTTTCGT CGACCGAGGA CGACGAGACC GGCGAGGTGC GCGAGACGCA CCGGCGACCG AACCTCGCTC CCTTCACGGA CGATCCCGAC TGCTGGCTCG TTGCGTCGAT CGAGGATTAC GACCTCGAAA CCGACACCGC AAAGCCGGGG CCTATCTTCA CCGAGCGGGT TATCGCTCCG CCCCCTGCGC CGATCATCAC TTCGGCAATC GACGCCCTGG CCGTCGTGCT CAACGAGCGT GGTGCCGTCG ATCCCGACCA CGTCGCTGAG CTCCTCCATC GCGAAAGCGA CGACGTAATC GCCGAACTCG GCGACGCGAT CTTTCGCGAC CCTGAGACCG GTGCCTGGCA GACCGCGGAC GCCTATCTCT CCGGCGCGGT GCGCTCGAAG CTTGTGGCCG CGCAGGCAGC CGCCAAACTC GATCCGATCT TTGCGCGCAA CGCCGCCGCA TTGGAACGCG TCCAGCCCGC GGACCTCAAG CCGTCCGACA TCACCGCGCG TCTCGGCGCT CCATGGATTC CGGCCACCGA CATCATCGCC TTCGTCAAGG AGACGATGGA AGCCGACATC ACCATCCACC ACACGCCCGA GCTCGCGTGC TGGACGGTGA ACGCCCGACA GTTGTCGTGG ACGGCGGCGG GGACCACGGA ATGGGGCACG CATCGTCGCC ACGCCGCCGA GCTTCTCTCG GACGCCCTCA ACTCGTCCGT CCCGCAGATC TTCGACATCG TGAAGGATGG CGACAGCGAG CGGCGCATTC TCAACACGGT CGACACCGAG GCAGCGAAGG AGAAGCTCCA GAAGATCAAG ACCGCGTTCC AAGGCTGGAT CTGGGCCGAC CCCGACCGTA CCGACCGGCT GGCCCGGCTC TATAACGACA CGTTCAACAA CATCGTGCCC CGTCATTTCG ACGGATCGCA TCTCCAGCTT CCGGGCGCCT CTGGCGCTTT TTCTCTTTAT GGGCACCAGA AGCGCGTCAT CTGGCGCATC ATTGCCTCGG GCGCGACCTA CGTCGCCCAT GCCGTCGGCG CCGGCAAGAC CCTCTCGATC GCGGCCGCGA TCATGGAGCA GCGCCGGCTC GGCCTGATCA ACAAGGCGAT GCTCGTCGTG CCGGGCCATT GTTTGGCGCA GGCAGCTCGC GAATTTCTCG CGCTCTACCC GAACGCCCGC ATCCTCGTCG CTGACGAGAC GAACTTCGTG AAGGAGAAGC GCCATCGTTT CCTGTCGCGG GCCGCGACCG CGAATTGGGA CGCGATCATC ATCACCCATT CCGCTTTCAA GTTCATCCCC GTCCCGTCCG TCTTCGAGCA GCAGATACTG CAGGACGAAC TCGAGGCCTA TGAGGAACTG CTGACGCGGA TCGATTCGCA GGATCGGCTA TCGCGCAAGC GCGTCGAGCG CATGAAGGAG GGCCACAAGG AACGGCTCGA GGCGCTGGCT TCGCGCAAGG ACGACCTCCT GACCATCTCG GAGATCGGTG TCGACCAGAT CATCGTCGAC GAGGCGCAGG AATTCCGCAA GCTCTCGTTC GCCACGAATA TGACGTCGTT GCGTGGCGTC GACCCGAACG GCTCGCAGCG CGCGTGGGAC CTCTACGTCA AATCGCGCTT CATCGATATG AAGAATCCCG GCCGGGCGCT CGTGCTCGCC TCCGGCACGC CGATCACCAA CACACTCGGC GAAATGTTTA CAGTGCAGCG GTTGATGGAT CGCGCGGCGC TCGAGGTGCG CGGCCTGCAC GAATTCGATG CGTGGGCGTC CACCTTCGGC GATACCTCGA CCGAACTCGA GCTGCAGCCG TCGGGCAAGT ACCGCCCGGT CACGCGCTTC GCGCAATTCG TCAACGTGCC GGAACTCATC GCCATGTTCC GCTCCTTCGC GGACGTGGTG CTGCCGGATG ACTTGCGCGC ATTCGTCAAG GTGCCGACGA TTGCCAGCGG CAAGCGGCAG ATCATCACGG CCCAGCCGAC GGCGGCCTTC AAGGCCTATC AGCGACTCCT CGACGAGCGT ATCACCGCGA TCGAGGAGCG CGACCGCGCG CCAGAGCCAG GCGACGACAT CCTGCTCTCC GTCATCACCG ACGGCCGCCA CGCGGCGATC GACCTGCGTC TCGTCGACTC GACGCAGGAC AACGAAGAGG GCAACAAGCT CAACGCCCTC ATCGCCAACG CGTTCCGGGT CTGGCAGGAG ACTGGCCACC ACACCTTCCG GCTCAAGGAC GGCCAGCCCT TCGAGAAACC CGGCGCGGGC CAACTCATCT TTTCCGACCT TGGCACGATC TCGGTCGAAG CCTCGCGCGG CTTCTCGGCC TACCGCTGGA TCCGCAACGA GCTCGTGCGG CTCGGTGTGC CAGCGCCCGA GATCGCCTAC ATGCAGGACC ACAAGAAGTC CGAGGCGAAG CAGCGCCTGT TCAACGACTT CAACGCCGGC AAGGTGCGCA TTCTACTCGG CTCGTCCGAT ACGATGGGCA CCGGCGTCAA CGTGCAGCTC CGTCTCAAGG CGTTGCATCA TCTCGACGTT CCGTGGCTTC CGTCGCAAAT CGAGCAGCGC GAGGGCCGGA TCGTGCGCCA GGGCAATCAG CACGACGAGG TCGACGTCTT TGCTTATGCG ACGCTCGGCT CGCTCGACGC CACCATGTGG CAAAACAACG AGCGGAAGGC TCGATTCATA GCCGCCGCGC TGTCGGGCGA CACCAGCGTG CGCCGGCTAG AGGACCTCGG CGAGGGACAG GCCAACCAGT TCGCCATGGC CAAGGCGATC GCATCCGGCG ATCCGCGCCT CATGCAGAAG GCGGGACTCG AAGCCGAGAT CGCCCGTCTC GAGCGGCTGC GCGCCGCCCA TATCGACGAT CAGCACGCCA TTCGTCGACA GATTCGCGAC GCCGGGCGTG AGATCGAACT TGCTACGCGC CGGATCGGCG AAGTCGGGCA GGACATCGAG AGGTTCATTC CGACCGCCGG CGATACCTTT GCCATGTCGG TCAAGGGCCA GCATTTCGCC GAGCGCAAGC TCGCGGGTCG CGCTGTGATG CAGGAGGTCC TGACACTCGT GCAGCTCCAG CACGACGGCG ACATCGCAAT CGCATCGATC GGCGGGTTCG AACTCAGGTT CGAGGGGCAA CGCCTCGGCC ACGACGGTTA CACCTACACC ACCATGCTTC AGCGAACAGG AGCGGTCTTC GAGATTGAGC TTTCAATGAC GGTGTCACCC CTGGGCGCGG TTGCGAGGCT GGAGCATGCG CTCTCAAACT TCCACGGCGA GCAGGAGACC TACCGTCGTC GTCTGCTCGA CGCACAAAAA CGGCGCGCGA CGTTTTCCGC TCGGGTCGGT GAAGCTTTCG CCTTTGACGC TGAACTTGGC CTCAAGCGCG AGGCGTTGGT CGCGCTCGAG GCAGATCTCG CCGCGAGCGG CGCCGAAGGG GAAAAGGAAA AGCCGGGAGT GGCAAAACGC ATCGCCGCAT GA
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Protein sequence | MTQKDPFTLD LFNNTSLSSG LGLGVTAFAT SVEGEDPDRD PSSPSSPAIS PMTVVQSETA RVAGENFYLA DSRGLAASWR DRARDNLVAI RLAADLEAEQ HPATSDEQAQ LIRFTGFGAS ELANGVFRRP GEDGFRKGWE VIGQQLVELV GTADYASLAR CTQYAHFTPE YIARAVWAGA LRLGFRGGRV LEPGIGTGLF PALMPKALRD VSHVTGVELD PITTRIAKLL QPRAMIVNED FARSSLKQHF DLAIGNPPFS DRTVRSDRAF RSLGLRLHDY FIVKAIDRLK PGGIAAFVTS HGTLDKADAT AREQIAAMAD LLGAIRLPEA SFRADAGTDV VVDILFFRKR RNGETVANDA WLDLSEVRAA TEDEGAIRVN RYFAERPDMV LGEHALRRGV YGPDETYTCL SRVGSDLETA LTAAVLQLPE AVYDGEPEAV RSDHAEPSAA TGREPQASAV REGSYFVGTN GALMQVVDGV AVTITVRKGR STDGIFEKHA RIIRKLIPIR DAVREILKCQ ETDQPWKQAQ VRLRIAWSSF VRNFGPINTT VVSSTEDDET GEVRETHRRP NLAPFTDDPD CWLVASIEDY DLETDTAKPG PIFTERVIAP PPAPIITSAI DALAVVLNER GAVDPDHVAE LLHRESDDVI AELGDAIFRD PETGAWQTAD AYLSGAVRSK LVAAQAAAKL DPIFARNAAA LERVQPADLK PSDITARLGA PWIPATDIIA FVKETMEADI TIHHTPELAC WTVNARQLSW TAAGTTEWGT HRRHAAELLS DALNSSVPQI FDIVKDGDSE RRILNTVDTE AAKEKLQKIK TAFQGWIWAD PDRTDRLARL YNDTFNNIVP RHFDGSHLQL PGASGAFSLY GHQKRVIWRI IASGATYVAH AVGAGKTLSI AAAIMEQRRL GLINKAMLVV PGHCLAQAAR EFLALYPNAR ILVADETNFV KEKRHRFLSR AATANWDAII ITHSAFKFIP VPSVFEQQIL QDELEAYEEL LTRIDSQDRL SRKRVERMKE GHKERLEALA SRKDDLLTIS EIGVDQIIVD EAQEFRKLSF ATNMTSLRGV DPNGSQRAWD LYVKSRFIDM KNPGRALVLA SGTPITNTLG EMFTVQRLMD RAALEVRGLH EFDAWASTFG DTSTELELQP SGKYRPVTRF AQFVNVPELI AMFRSFADVV LPDDLRAFVK VPTIASGKRQ IITAQPTAAF KAYQRLLDER ITAIEERDRA PEPGDDILLS VITDGRHAAI DLRLVDSTQD NEEGNKLNAL IANAFRVWQE TGHHTFRLKD GQPFEKPGAG QLIFSDLGTI SVEASRGFSA YRWIRNELVR LGVPAPEIAY MQDHKKSEAK QRLFNDFNAG KVRILLGSSD TMGTGVNVQL RLKALHHLDV PWLPSQIEQR EGRIVRQGNQ HDEVDVFAYA TLGSLDATMW QNNERKARFI AAALSGDTSV RRLEDLGEGQ ANQFAMAKAI ASGDPRLMQK AGLEAEIARL ERLRAAHIDD QHAIRRQIRD AGREIELATR RIGEVGQDIE RFIPTAGDTF AMSVKGQHFA ERKLAGRAVM QEVLTLVQLQ HDGDIAIASI GGFELRFEGQ RLGHDGYTYT TMLQRTGAVF EIELSMTVSP LGAVARLEHA LSNFHGEQET YRRRLLDAQK RRATFSARVG EAFAFDAELG LKREALVALE ADLAASGAEG EKEKPGVAKR IAA
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