| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4466 |
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| Symbol | |
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| ID | 4025477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 112846 |
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| End bp | 113469 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964973 |
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| Product | autoinducer synthase |
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| Protein accession | YP_571881 |
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| Protein GI | 92109594 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGATGG TCATCCCCGG CTCGGACATC AGTCGCCATG CGGCGCTGAT GGACCGGGCT
TTCCGTTTCC GCCACACGGT ATTCGTTGAC GAAAAGGGCT GGGAGGACCT GCGTCAGCCC
GATGGGCGCG AACGCGACCG CTTTGATGAC GCGCATGCCA TCCACCACAT TTGCCTGCGC
GGCGACGACA TCGTCGGGTA CCAACGGCTG CTGCCGACGA CACGGCCGCA TTTACTTAGC
GACGTGTTGA CGGACCTATG CCGGCATCGG CCGCCGCGCG GTCCACGTGT GTACGAGTGG
ACGCGCTTCA GCGTCGCGCC AGGACGCCGC GAGATGCGGC CGCACGGCGA CGCGCCCTTC
CTCGAACTGG CACTGGGTGT CGTCGAGTGG GGGATGGTGA ACAAGGTCGA CACGGTGACG
GTCGCCATCG ACTGGCGGCT TATGGTGATC GCGATGCAGC TGCGCTTCTT CGTGCGCACG
CTGGGTTTTC CCAAACGCGT CGGCCGCGAC GAGGCGGTCG CCCTGCGCAT GTCTTTCAAC
CGCGAGACGC TCGCCGCAAT CCGGCAGGCG CGCGGCTGTG ACGATCGCGT TTTGCCCGAT
GCCATGTTGC CTACGGCTGC GTGA
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| Protein sequence | MLMVIPGSDI SRHAALMDRA FRFRHTVFVD EKGWEDLRQP DGRERDRFDD AHAIHHICLR
GDDIVGYQRL LPTTRPHLLS DVLTDLCRHR PPRGPRVYEW TRFSVAPGRR EMRPHGDAPF
LELALGVVEW GMVNKVDTVT VAIDWRLMVI AMQLRFFVRT LGFPKRVGRD EAVALRMSFN
RETLAAIRQA RGCDDRVLPD AMLPTAA
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