| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4448 |
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| Symbol | |
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| ID | 4025459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 94575 |
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| End bp | 95327 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637964956 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_571864 |
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| Protein GI | 92109577 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATTC GCGTCGCAGC GATCGGGTTC GGCGTCCTGG CGAGTCTCGC GGGCGCAGCG
GCGCAAGACG CGAGGCCGCA GACGCTGGCT GCTGTCGACG CCTCAGGACA CGTGCTGCCG
CTCGGCGCCG CGCCCGTTTC GGTAGAGCGG ATCGGCGCTG CCCAGGTGTC CCAGGTCGCC
TCGCCTTGCC CCGACGCCGT GGCGATGGTC CCGGAGGAGG CCCGCGCGCT CGTCACACGC
ATCGCGACGG AAGAGGCCTT CTATCCAGAC TTCGTACTGT CCGTCGCAAA GGCGGAGAGC
CAGTTCAATT CCGTAGCGCT CTCGGACAAG GGTGCCTTCG GGCTGATGCA GCTCGAGCCG
GAGACGGCGC AGCGCTTCAA GGTCGACCTT TGCGATCCCG TCGGAAACAT CCGCGGCGGC
ATCCGCTTCC TTCGCGCGCT GCACGAGAAA TATCGCAATC CGCTCTTCAT CCTGGCCGCC
TACAACGCCG GAGAGGGCGC CGTCGAGCAA AGCCGAGGCG TTCCTCCTTA TCCCGAGACG
GTGCGCTTCG TCGCACAGGT CCTCAACGAC TTCTACGCGT GGCCAGCGCT CGGCCCAGCC
GCGGCACGCG GCCCGCTTCG ATCTGCGTCC CGGACGCTAG AGGCGCCCGA CTTGATCGAG
CCGCGAGAGG CCACCGCGCC GCCCAAGACA CCGAAGCCAG CCCCCAAAGA CCGCACGCGG
TGGGATAACG GCTTTGTCAT GCACGTCGAC TAA
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| Protein sequence | MLIRVAAIGF GVLASLAGAA AQDARPQTLA AVDASGHVLP LGAAPVSVER IGAAQVSQVA
SPCPDAVAMV PEEARALVTR IATEEAFYPD FVLSVAKAES QFNSVALSDK GAFGLMQLEP
ETAQRFKVDL CDPVGNIRGG IRFLRALHEK YRNPLFILAA YNAGEGAVEQ SRGVPPYPET
VRFVAQVLND FYAWPALGPA AARGPLRSAS RTLEAPDLIE PREATAPPKT PKPAPKDRTR
WDNGFVMHVD
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