| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4440 |
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| Symbol | |
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| ID | 4025451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 87674 |
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| End bp | 88390 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637964948 |
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| Product | VirB8 |
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| Protein accession | YP_571856 |
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| Protein GI | 92109569 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGAGA CAACAGCCTC AGAGTCCGCG CGGGTCGATT CGCGCTATTA CGCCGACGGC
GCGACATGGG AGCGGGATAT CGCGCGCCGA AATCGCAATT CGCGGGCGCT TGCCTGGATC
GTCGCCGCGG TCATGACAAT CGTGGCCGTC GGCGCACTCG GCACCTTGGC TTTGCTGGTC
CCGCTCAAGA CCTACGAGCC GTACATGGTC GTGGTCGACA AGACCACCGG CTTCGTCGAG
GTGAAGCGGC CGATGGCGGA GGGTCCGCTG ACCCAGGACG AGGCCGTCAC GACATTCAAT
GTCGTCCGCT ACATCAAGGC GCGCGAGACC TATGACCCGA AGGCGCTGAA AGATAATTTC
GATCTGGCGC AATTATTGGC CAGTGGCGAT GCGAGCCGTG AACTGACCGA AATCTATTCG
CCCGCCAATC CCAGCAACCC TGTGAAAGTC TTCGGTTCGA ACACCGTGAT CGCCGTCAAC
ATCAAGTCCG TGACCTTTCC GAACAACCGC ACGGCGCTCG CGCGTTTCTC CACCGAGGAG
AAGTCCTCGA CCAACATCAT CACCCGCAAC TGGGTGTCGC TGGTGCGCTT CCGCTATACC
TCCGCGCCGA TGCGTAACGA ATGGCGGTTC GACAATCCCC TCGGTTTCCA GGTGCTCGAG
TATCGCCGCG ATCAGGAGAC CGCGCCCTCA CCGGGAACGG TAGGTGCGCA GCAATGA
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| Protein sequence | MTETTASESA RVDSRYYADG ATWERDIARR NRNSRALAWI VAAVMTIVAV GALGTLALLV
PLKTYEPYMV VVDKTTGFVE VKRPMAEGPL TQDEAVTTFN VVRYIKARET YDPKALKDNF
DLAQLLASGD ASRELTEIYS PANPSNPVKV FGSNTVIAVN IKSVTFPNNR TALARFSTEE
KSSTNIITRN WVSLVRFRYT SAPMRNEWRF DNPLGFQVLE YRRDQETAPS PGTVGAQQ
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