Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_4439 |
Symbol | |
ID | 4025450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007960 |
Strand | - |
Start bp | 86874 |
End bp | 87677 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637964947 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_571855 |
Protein GI | 92109568 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGG GTTGTGCCGT CTTAACTGTC GTACTCTGCA TCACGGCCGG CGCCGCCTTC GCGGAGGCGC TGCCGCGGCC GGGTCGCGTC GATTCGCGAG TGCGGGACGT CGTCTACAAC AAGGACAACG TAACCGCGAT CGATGCGAGC TATGGCACCT CGACGATGAT CGAGCTACAG CCCGACGAGA AGATCGAAAC GCTGGCGCTC GGGGATTCAA TCGCCTGGAA GGTCGAACCG AACCGCAAGG GTGACGTCAT CTTCGTCAAG CCGGTTGAAA AGAACGCCCA GTCGAACCTC AACGTCGTCA CCGACAAGCG CATCTATTCG TTCCTGCTGC GCTCGAACAC GCGGCCGCCG GCAGGGCAGA TCTACGCGGT GCGATTCCGG TTTCCGGATG ACGAGGCCAG CGCGAAGCTC TTGGCTGAAG CCAAGGAGCG CGCCGCCAAT CCGAATCTCA AGGATCTCAA CATCGCCAAC GCCAACAGCG ATTACGGCTA CAAGGGCTCG TCAGTGAACA AGCCGGTTGC CGCGTTCGAC GATGGGACCA AGACCTGGTT CCGCTTCGAG GGCGAGACGC CGGCGATCTA CATCGTCGAT GGTGACCGCA ATGAAAGCCT CGTCAATTTC CGGACCGAGG GGCCTTACGT CATCGTCGAC AAGGTGTCGC CGCAGTGGAC GCTGCGCAAC GGCCAGGAAT CGACCTGCGT CTTCAACCGC CGTCTGAACA ATGTGCATGA GCCGAACGGG CTCGAGCCCT ATGCGCCGCA GCGTGTGGGC TCGGCAACGA ATCTGGGAGG TTGA
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Protein sequence | MIKGCAVLTV VLCITAGAAF AEALPRPGRV DSRVRDVVYN KDNVTAIDAS YGTSTMIELQ PDEKIETLAL GDSIAWKVEP NRKGDVIFVK PVEKNAQSNL NVVTDKRIYS FLLRSNTRPP AGQIYAVRFR FPDDEASAKL LAEAKERAAN PNLKDLNIAN ANSDYGYKGS SVNKPVAAFD DGTKTWFRFE GETPAIYIVD GDRNESLVNF RTEGPYVIVD KVSPQWTLRN GQESTCVFNR RLNNVHEPNG LEPYAPQRVG SATNLGG
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