| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4438 |
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| Symbol | |
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| ID | 4025449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 85530 |
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| End bp | 86867 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637964946 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_571854 |
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| Protein GI | 92109567 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAGCG CCGACGACTA TCGCTCGTTC GAACTGGAGG CGGCGGCCGC GACCTCCGTC
GCGCGCGGCC GCACCGCGCT CGGCAGCTTC CTGAAATTTG GGGTGCCGAT CGGCGCGCTC
ATGGTGGCGG CCTGGATAAT TTACGGCTCG GTGGCGCGAC GCGCGCCGAC GCTGACAACG
CCCGACAAGG AGGAGTTCAC AACGACACAG TTTCCCGCAC CCTCGCTGTC GTCGCCGCGG
ACGCAAACCA ACCAGGGCAT GATCGTCATC CCACAGGCGC CGGCCGAACC ACCTTCTCCC
CCGGTTGCAC CTCCCTTGGC GCTTCCGGCA CCACCGCCAC CTGAACCGCC GCGCGCCGCA
GCGCCCCCGA ACGACGACGA GGCGCGCCGT CTCGCCGAAC TCGAGCGCCT GCGTCAGGAA
GAGAGGCGGA AATGGGAACG CCTGCGCGCG CCCCAGGTGA TCGCCGACAA TGCGGCGGCG
GCCGCCGCAC GAAATCCCGA GGACGGGAGC AAGGCGGCAG CGGGTCCGGA CGATGATCCC
AATCGCCGGT TTCTGGCCTC GGTGTCAGCT GCCGGCGTCG AGGTCTCGCG CGCCACCAAG
AACAATCGGA TCGATGCGCT GGTCGCGCAG GGCACGATGA TCCGCGGCGT ACTGGAGACG
GCGCTCCAGA GCGATCTGCC CGGCATGGTC CGTGCGGTCG TCAGCGAGAA CGTCTGGTCC
TTCGACGGTC GCCGCGTGCT GATCCCGGCC GGCAGCCGTC TCGTCGGCGA ATATAAGTCG
GGCATCGCCC AGGGTCAGAC CCGCGTGTTC GTCGTGTGGA CACGCATGCT GCGGTCGGAC
GGCGTCTCGG TGCAGCTCGG CTCCAACGGG GCGGACGATC TCGGCCGCGC GGGCAACGCC
GGCTTCGTCG ACAACCATTA TCTGGAGCGC TTCGGTTCGG CGATCATGCT GTCGGTCGTT
GGTGGGGTGT CGCAATTCCT TAGCGCCTAT GGCCAGAACA CCAACACCAA CGGCAACGGC
TCCATCATTA CAACGACCGA CCCGGTGACC GGGATCGTCA CGCAGACGCA AACCGGCGTA
AATCAAAGCC AGCTCAGCCT GCAGGCGCGC GCGATCGCCG CGCAGAACGT GTCGCAGACC
CTCACCAATA TTGCCCAGCA GGCGCTGCGA AACTCGATCA ACATCCCGCC CACCATCTAC
CTCGACCAGG GTACCCAGAT CATTGTTTTC GTGCGGCGCG ACCTCGACTT CTCCGCGCTC
TATTCCGACC CGGTCAAGGA AGCCTTGAGG GAGCTGAAAC GTGAACGCAT TGGCGCGAAG
CCTGACGGTC TTCATTGA
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| Protein sequence | MPSADDYRSF ELEAAAATSV ARGRTALGSF LKFGVPIGAL MVAAWIIYGS VARRAPTLTT
PDKEEFTTTQ FPAPSLSSPR TQTNQGMIVI PQAPAEPPSP PVAPPLALPA PPPPEPPRAA
APPNDDEARR LAELERLRQE ERRKWERLRA PQVIADNAAA AAARNPEDGS KAAAGPDDDP
NRRFLASVSA AGVEVSRATK NNRIDALVAQ GTMIRGVLET ALQSDLPGMV RAVVSENVWS
FDGRRVLIPA GSRLVGEYKS GIAQGQTRVF VVWTRMLRSD GVSVQLGSNG ADDLGRAGNA
GFVDNHYLER FGSAIMLSVV GGVSQFLSAY GQNTNTNGNG SIITTTDPVT GIVTQTQTGV
NQSQLSLQAR AIAAQNVSQT LTNIAQQALR NSINIPPTIY LDQGTQIIVF VRRDLDFSAL
YSDPVKEALR ELKRERIGAK PDGLH
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