| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4437 |
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| Symbol | |
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| ID | 4025448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 84509 |
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| End bp | 85558 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637964945 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_571853 |
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| Protein GI | 92109566 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGCGAA GCCTGACGGT CTTCATTGAT CGGGCCCTTG AACCGATCCG GCCGTGGCTC
AAGGATGATC AGGTCGTCGA GATCTGCGCC AATGGGCCGG GTGAGGTCTG GGTCGAGCGG
TTTGGCCAGT CGGCGATGGA ACGCCATGAC GTCCCACATC TGACGGAGCA CGCGCTGCGC
CACCTCGCGG AGCGCGTCGC CGGCCATTCC GGTCAGAGCG TCAATGAGGA GCATCCGCTG
CTGTCGGCCG CCTTGCCGAC CGGCGAGCGC TTCCAGGGCG TGATGCCGCC GGCGACCACC
GCCGGGGGCG CGTTCGCGAT CCGCAAGCAG GTGATCAAGG AGATGCGGCT CGACGATTAC
CGCAAGCTCG GCTCCTTCGA AAAAGTGTCG ACAGCGGGCG AGGGCGCCCT CTCCGAAACC
GACCGTCGGC TGTGCGAACA CCTCGATGCT GGCCGGATCG AGGACTTCAT CCGCTTGGCG
GTCGCCAACC GCTATTCGAT CCTTCTGTCG GGCGGGACGA GTTCCGGCAA GACAACATTT
TTGAACGCAA TTCTTAAGGA AGTGCCGGTC GACGAACGCA TCATCACCAT CGAGGATACG
CGGGAGGTCA ATCCGATTCA GAAAAACTAC CTGCCGCTGG TCGCCTCCAA AGGAGACCAG
GGCGAGGCGC GTGTCACGGT CGAAACCTTG CTGCAGGCCT CGATGCGGCT TCGGCCCGAC
CGCATCTTTC TCGGCGAGAT CCGCGGCGCC GAGGCCTATT CATTTCTGCG CGCCATCAAC
ACCGGCCATC CCGGCAGCAT CACCACGGTG CATGCCGACA GCCCAGCGGG CGCGTTCGAG
CAACTCGCGC TGATGGTGAT GCAGGCGGGA TTAGGCCTGC GGCGCGACGA GATCGTCGGC
TACATCAAGT CGGTGCTGCC AATCGTGATC CAGCAGACCA AGGTCGGCGG CTGGCGCGGC
ACGTCGGCGG TGCATTTCTC GCGCATGGCG GAATGGCGGG AGCAGCGGAC CGGAGGGAAA
GGCCGTCATG GCGCGCGTCG TCGCCTATAG
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| Protein sequence | MARSLTVFID RALEPIRPWL KDDQVVEICA NGPGEVWVER FGQSAMERHD VPHLTEHALR
HLAERVAGHS GQSVNEEHPL LSAALPTGER FQGVMPPATT AGGAFAIRKQ VIKEMRLDDY
RKLGSFEKVS TAGEGALSET DRRLCEHLDA GRIEDFIRLA VANRYSILLS GGTSSGKTTF
LNAILKEVPV DERIITIEDT REVNPIQKNY LPLVASKGDQ GEARVTVETL LQASMRLRPD
RIFLGEIRGA EAYSFLRAIN TGHPGSITTV HADSPAGAFE QLALMVMQAG LGLRRDEIVG
YIKSVLPIVI QQTKVGGWRG TSAVHFSRMA EWREQRTGGK GRHGARRRL
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