| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_4436 |
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| Symbol | |
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| ID | 4025447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007960 |
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| Strand | - |
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| Start bp | 82387 |
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| End bp | 84531 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637964944 |
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| Product | TRAG protein |
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| Protein accession | YP_571852 |
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| Protein GI | 92109565 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCG TCGTCGCCTA TAGGATCGGC ATCGCGGTCC TGCTGCTGCT CGCCTTCTGG
CTGTTGTGGA GCATGGCCTA CGAGGTTGTC GTGGCTCTTC GCTGGGCGCC GAGCCGGTTT
CCCAGCGAAG GCGCATCCCG CTGGGCTTTG TTCCGGATGC AGAACACCGA TCGCTCCGTC
GACTTCTTTC TGATCGCTTG GCGTCATTTC TATGACCGGC TGCTGTTTCC AAGCATGCGC
CTCGAAGCGC TGATCCGCGC CGGCTATGCC GTGGCCGCGG TTGGCGCGCT CGCCATCGCC
GGGGTCATGT TTGCGGTCAT CAATCGCCGG CAGATGCCCT ACGGCGAAGC CCGCTTCGGC
ACGCTGATGG AGGCAGCCAG GCAAGGCCTC ACGGCGAAGC AGGGCATCGT CCTGGGGACA
TTGGGTGGGG CGACCATCCG CTCGGACGAA CCGGCACACA TTCTCGTCGT CGGCCCCTCA
CGGTCGGGCA AAGGCACTGG CTTCGTCCTT CCGAATGGCT ACCTCTGGCA GGGCTCGGCC
GTGTTCTTCG ATCCCAAGCG CGAGAACTTC GACGCGCTGG CCAATCATCG TGCGGCCATG
GGCAACAAGG TGTTCATGTT CTCGCCCGGC TCGAACGACA CCCATCGCTA CAATCCCCTC
GACTTTGTCC GGCGGGACGC GCGGATGGCG ACGGACTGCC TGGTGGTGGC GTCGTTCGTG
ATCCCTGAGA AGGCCGACGA TACCTGGGCG GGCGCCGGCC GTCTCCTGCT CTCGGCGCTG
ATTGGCTACG TCCTGTCGTC GCCCTTGATT GCCGGCGCAC AGCATATGCG CACCGTCGCG
CGAATGACCA CAACGGGCAA GGACATTTCA TCGGTCTTGC GCGCCATCGT GAAAACCGAA
TGTCAGCATC TCCCGACCTG GGTCGTCGAC AGCTTTAACC AGTATATCGC GCTCGAGCCG
GAGACCCGCA ACAGTGCGGT GTTCAACGTC AATATGGCGA CGTCGCTGTG GAACAACGGG
CTGATTTCGG CGGCGACTGA GACCTCCGAC TTCGACATCC GCGAACTGCG CCGTCAGCCG
ATGACCATCT TCATCGGCTG CACCATCGCG GAGCTCTCGA TCTTCCGGCC GCTGATCCGG
ATTCTGTTCC AGCAGATCCA CGACCTGATG ATGGTGAAGA TTCCAGGCGC GGACGAACCA
CACCAGGTGC TGCTGATGCT CGACGAATTC TACCATGTCG GGCGGATGGA TTCTCTGATC
TCCAAGATCA CGATCAGCGC CGGCTACGGC TTTCGCATGG CGATTGTCAT GCAGGATATC
GCGCAGCTCG ATGAACTCTA CGGCAAGAAT ACACGCATCA CCACGGTATC CGGCTCGCAG
ATCAAACTCT TCATCCAGAT CAACGACCTC GAAACCTCAG ACTTCGTGTC CGAGATGCTC
GGGGAGACTA CGCAAGTCTA TAAGACGCCG ATCCAGCGGC CAGGGCAGGG GATCTTCGCA
CCGCGCGTCT GGGCGCCGCA TTATACGCCC CGGCCGCTTC GCAGTCCGCT CGAGCTTCGG
GAAATGTCAG CGCGGCTCTC GATCCTGATG GTGAAGAACT CACGATCGTT TGAATTGACG
AAAATCCGGC ATTATCTCGA TAAGCCATAC AGGGCCTTCT ACGAGAAGGC CAAGGGATCG
CCGCCAGTCT TGCCGGCGTT GCGAGACTGG CAGGACGAGT CTCTCGGCGG CGCGATCAAT
CCGATGCCCG ACCAAACGAA AAAACTGGCG GATGCCGGCC CAGCCCCAAT GGAAATGAAC
TCACCAACTC CACGAAAGAC AAAGTCGCGG CGCCCTCCAA AATCGGCATC CAACAAGGCG
ACGGCAACAG AACGGCCTCA AGCCCCGGCC GCGCCGCTCA CGCTGGTCGC GCGACGAACG
GCAAAGCCTG AATCGAAATC TCTGTCACTT GGTATCGCGC CACCCGCTCC GCCGGGAGAA
AGCTGTGACG TTCGCAATAT CCTGAAGTCT GCCGAGGCTC GCCAGGACGA AGAGTTCTCC
GCCATGATGC GTGTCTTGGA TACCTCATCT GGATCCAAAA CGCGTGAGGC AGCCGACACT
CTCGCATTAT TGCACCGCTC CTTTGGCGAT GACACGAAAC CGTAA
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| Protein sequence | MARVVAYRIG IAVLLLLAFW LLWSMAYEVV VALRWAPSRF PSEGASRWAL FRMQNTDRSV
DFFLIAWRHF YDRLLFPSMR LEALIRAGYA VAAVGALAIA GVMFAVINRR QMPYGEARFG
TLMEAARQGL TAKQGIVLGT LGGATIRSDE PAHILVVGPS RSGKGTGFVL PNGYLWQGSA
VFFDPKRENF DALANHRAAM GNKVFMFSPG SNDTHRYNPL DFVRRDARMA TDCLVVASFV
IPEKADDTWA GAGRLLLSAL IGYVLSSPLI AGAQHMRTVA RMTTTGKDIS SVLRAIVKTE
CQHLPTWVVD SFNQYIALEP ETRNSAVFNV NMATSLWNNG LISAATETSD FDIRELRRQP
MTIFIGCTIA ELSIFRPLIR ILFQQIHDLM MVKIPGADEP HQVLLMLDEF YHVGRMDSLI
SKITISAGYG FRMAIVMQDI AQLDELYGKN TRITTVSGSQ IKLFIQINDL ETSDFVSEML
GETTQVYKTP IQRPGQGIFA PRVWAPHYTP RPLRSPLELR EMSARLSILM VKNSRSFELT
KIRHYLDKPY RAFYEKAKGS PPVLPALRDW QDESLGGAIN PMPDQTKKLA DAGPAPMEMN
SPTPRKTKSR RPPKSASNKA TATERPQAPA APLTLVARRT AKPESKSLSL GIAPPAPPGE
SCDVRNILKS AEARQDEEFS AMMRVLDTSS GSKTREAADT LALLHRSFGD DTKP
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